Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 6e-16 seq3 95.1 8e-15 >seq2 Length=1413755 Score = 98.7 bits (108), Expect = 6e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||||||||| |||||||| ||| | || | || |||||||| || ||| Sbjct 127540 GTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTGCCG 127481 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || | || || ||||| | || | ||||||||||| || |||| || Sbjct 127480 GCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAACCTTCGACTTC 127421 Query 34905 ACGGATG-CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGT 34963 || ||| | |||| || | | ||| || || | || || || || || |||||||| Sbjct 127420 ACA-ATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTCTTGCCAGTGAGAGT 127362 Query 34964 CTTCACAAAGATCTGCAT 34981 ||| | |||||| ||||| Sbjct 127361 CTTGATAAAGATTTGCAT 127344 >seq3 Length=1023756 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || | || |||| || ||||| || |||||||| Sbjct 657152 TCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 657093 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||| |||||| Sbjct 657092 ATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 657033 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || |||| ||| || || || ||||| |||||||| ||| Sbjct 657032 TCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACA 656973 Query 34971 AAGATCTGCATA 34982 |||| ||||||| Sbjct 656972 AAGACCTGCATA 656961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633536696448