Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 >seq1 Length=1557178 Score = 120 bits (132), Expect = 2e-22 Identities = 417/655 (64%), Gaps = 37/655 (6%) Strand=Plus/Plus Query 29764 GTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGG 29823 ||||| || | | |||||| | ||||||||| |||||| || | ||||| || ||| Sbjct 570666 GTGGGGAACGCGCGGGGCTCGCGCTCGAGCTGCTCCTTCAGGGGCCCGACGTGGTCGAGG 570725 Query 29824 TAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29883 |||||||| ||||| |||| | | | ||||| | | || || |||||||| Sbjct 570726 TAGACGTGTGCGTCGCCCATCGCGAGCGTGAACTCGGCGGCCTCGCATCCCGTGACGTGC 570785 Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943 || || | || ||| || || | |||||| || ||||| ||||| || ||||| || | Sbjct 570786 GCAATGAGGTGCGTCAGTAGCGCGTAGCTAGCAATGTTGAAGGGCACGCCGAGGCCGAGA 570845 Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT---------------CTCCG---TCG 29985 || | ||| | |||||| | ||| |||||||||| || || ||| Sbjct 570846 TCGCACGAGCGCTGGTACATCTGGCACGAGAGCTGCGGCTTGCGCCCAGCTGCGGCCTCG 570905 Query 29986 CTC---------------ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATG 30030 | || | ||||| |||| | | |||||||| || || ||||| Sbjct 570906 TCCGGCGTAGGCAGTGCGACAAAGAACTGGCACAGGATATGGCACGGCGGGAGGGCCATC 570965 Query 30031 AGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC 30090 || || |||| |||||||| |||| | | ||||| | ||| ||||| || Sbjct 570966 AGCGGCAGGTCTGGCGGGTTCCACGCGCTGAGCAGAATGCGGCGGTCGGTGGGGTTCGTC 571025 Query 30091 CTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC--TGCCC 30148 |||| ||| | | | | ||||| || || || | || |||||| || || Sbjct 571026 TTGATCTGGTGGATGACCTGCGCGAGCTGGTCGACGCCTTTGCCGCTGTAGTCCGTGTCC 571085 Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208 | ||| ||||| || || || || | ||||||||| ||||| || || ||||||| Sbjct 571086 GC--GTCGACGTACTGCGCGCCAAAGTGACGCCACTGGAAGCCGTAGACGGGGCCCAGGT 571143 Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268 | ||||| | ||| | | || | ||| | | || || || |||||| ||| Sbjct 571144 CGCCCTCGCGGCGGTGGCCCAGACCGCGCTTCTTGAGGAACTCGGCAGAGCCGTTGCCGT 571203 Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328 ||||||| | || ||| | |||| |||| || || || | ||||| Sbjct 571204 CCCAGATGTGCACGTTGCGCTCCGCGAGCAGGTTGGCGTCCGTCTTGCCGGAAATGAACC 571263 Query 30329 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||||||||||| | ||| | ||||||| | ||||||||| || || || Sbjct 571264 AGAGCAGCTCCTCGAGCACGCCGCGGAAAAAGACACGCTTGGTCGTAAGCAGCGG 571318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617520319568