Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 286 6e-72 seq1 219 8e-52 >seq3 Length=1023756 Score = 286 bits (316), Expect = 6e-72 Identities = 1034/1600 (65%), Gaps = 72/1600 (5%) Strand=Plus/Minus Query 212551 TCACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCT 212610 ||||||| ||||| | | | ||||||| ||||| || |||||| ||||||||| Sbjct 988460 TCACCGTGAACTGAATGGCGTTGGCAGCAGGGCGAGTGCGCAGGTAGTACGTGCCGGTCT 988401 Query 212611 TTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCT 212670 | || ||||| |||||||| | |||||| | || || | || || Sbjct 988400 TGAGACCCTTCTTCCAGCCGTAGAAGTGCATCGAAGTAAGCTG-----GCCAAA------ 988352 Query 212671 GGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCC 212730 |||| | || || || | ||| || ||| ||||| ||||| | | | | Sbjct 988351 GGTCGGCGCACTG----AGGTGAATGTTGAGACTCTGGCTCTGACAGATGAACGCGCCAC 988296 Query 212731 TGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTT 212790 ||| || |||||||| || || | | ||| | ||||||||| |||||| ||| Sbjct 988295 GGTCCGCAGCCATGTCGATAATCACCTTTTGGCTAATCTCCCACACCGTCTTGTAGAGCG 988236 Query 212791 CTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCA 212847 | |||| || |||| ||||||| |||||| | || || | ||| ||| | Sbjct 988235 CCTTGATACGGTCGGGGATACCGGGGACGTTCTGGATCGAACCACCGTGGGCAATGATGC 988176 Query 212848 GCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGA 212906 ||||| ||| ||||||||||||||||| || || || || | | | ||| Sbjct 988175 GCTGCTT---CATCGCCTCGTTCCAGAGGCCC-TGCTCGACAAGCTCGCGGAGCAGCCAG 988120 Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 ||||| || | |||||| ||||| | ||||| | | | ||||| ||| ||||| Sbjct 988119 GGGTTCACCACCTGGAACTCACCGGCAAGCACGCGGCGCATGTAAATGTTGTTCGTGTAA 988060 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||||||| || || ||||| || || || ||||| || || Sbjct 988059 GGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTCGTCGACGCAGTCGGCATCGGCGCG 988000 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 | || || ||| | || ||||||| | | || | | ||||| ||||||||| Sbjct 987999 AGGAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTGGCCTTGAGCTCAGCCCAGTCC 987940 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || |||||| | || |||||||| ||| |||||| |||||| | Sbjct 987939 CAG---------AGGTCCGTGGGGGTCTTGTTCCACAGGTCGTACTGCAGGATGCCCTGC 987889 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 | |||||||||| ||| | ||| || ||||||||||| |||||||| || Sbjct 987888 GAGGCAGGGCTGCCCTCGTAGGTCTCGTACACACCCTGCTCCTTGGCAAGCTCGCACGAG 987829 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || ||||||||||| |||||| || || || |||| | ||||||| | ||||| Sbjct 987828 CGCTCCAGGGCAGCGTGGTAGATCGTCTCGAAGATCTGCAGGTTGAGCATGCGCGCCTC- 987770 Query 213267 GGGGACGTGAAGGGCAT----CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCC 213322 || | || || || || ||| || | | || | || ||||| ||||| || || Sbjct 987769 GGAGCTGTCAAAGGGATAGCCCATAAT-CATA--AAGGCGTCCGCCAGGCCCTGAACACC 987713 Query 213323 GATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGT 213381 ||| || || || | ||| | || ||| || | | || ||| || | |||||| ||| Sbjct 987712 GATACCAATCGGGCGGTGGCGCATGTTGGAACGGCGCGCGCTC-TCGACGGGGTAGTAGT 987654 Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441 || ||| || || ||| ||||| | |||| |||| | | |||| Sbjct 987653 TGATGTCAATAATGCGGTTCAGGTTCTTGCACACCACCTTGGCCGTCTCGTGCAGGCGGG 987594 Query 213442 CGTGATTGAAC-------ACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTG 213494 | ||| || ||| |||| | ||| | ||| ||||||||| || | Sbjct 987593 CAAAGTTGTACTTCTTCGACG-AGCCAGTGCCCTCAATAAAGGTAGGCAGGGCAATCGAG 987535 Query 213495 GCCAGGTTGCAAACGGC---CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCAC 213551 ||||||||||| ||||| | | ||| | ||| ||||||| || ||||| |||||| Sbjct 987534 GCCAGGTTGCACACGGCGGTCTCATCCGGCGAGC---TGTACTCGATAATCTCCGTGCAC 987478 Query 213552 AGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCC 213611 ||||| | ||| |||| ||||| ||||| ||| |||||||| |||| Sbjct 987477 AGGTTCGACGACTTGATCACACCCACGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCC 987418 Query 213612 TTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGG 213671 |||||||| || |||||| || ||||| | ||| | | | || | | | |||||| Sbjct 987417 TTGTAGAGAATAAAGGGGGTACCCGTCTCGATCTGCGCCTCAAGGACCGCGTACCAGAGC 987358 Query 213672 TACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAG 213730 | | ||||||||| || || || ||| | | || |||||| | |||||||| Sbjct 987357 TTCTGCGCCTTGACCGTACG----ACGGCCGCGGCCCTCGCGCTCGTAGCGCTCGTAGAG 987302 Query 213731 CTCGTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGACAGGATGCGGGACACAT 213787 ||| | ||| || | ||| || | |||| || || || || || || ||||| Sbjct 987301 CTCCTCGAACTCCTCGCCGTAG---CAGTCCGCGAGGCCAGGGCACTCGGCAGGGCACAT 987245 Query 213788 GAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846 || ||||||| || | | ||| ||| | || ||||||||| || |||||||| || | Sbjct 987244 CAGCGTCCAGTCACCACCCTGCTC-GACACGCTTCATGAACAGATCAGGGACCCATAGGG 987186 Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906 || ||| ||||| | | | ||| ||| || ||| ||||| || || | | Sbjct 987185 CGTAGAAAAGGTCGCGCGCACGAACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCAATGA 987126 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCT 213963 | ||||||| ||||| |||||||||||| | ||| |||||||| || || | || | | Sbjct 987125 ACTCAAAGACGTCCGAGTGCCACGGCTCAAGGTAAATGGCAAACGCACCAGGGCGCTTGT 987066 Query 213964 TGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023 |||| |||||||| || | |||| ||||| | | || || | ||| | | | Sbjct 987065 TGCCACCCTGGTCGACATAGCGGGCCGTGTTGTTGTACACACGGAGCATGGGAATGATAC 987006 Query 214024 CGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGG 214083 ||||| ||||| || || || || ||||| |||| | | | | | ||| Sbjct 987005 CGTTGCTAACACCGTTCGTGCCGGCAATGTACGAACCGGTACCACGGATGCAGTGGATGT 986946 Query 214084 AGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 ||| || || |||||||| |||| ||||| ||||| Sbjct 986945 TGAGACCGATACCACCGGCCGTCTTGCTAATCATCGCGCA 986906 >seq1 Length=1557178 Score = 219 bits (242), Expect = 8e-52 Identities = 547/825 (66%), Gaps = 18/825 (2%) Strand=Plus/Minus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| || ||||| | ||| |||| | ||||||||||||||| ||| ||||||||| | Sbjct 1053699 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 1053640 Query 47920 TGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCG 47977 | ||| || | || || ||| | | | |||||| | ||||| || |||| Sbjct 1053639 CGAGTTGTAGTGCTTCGAGTT--GCCGAGCGCGACAAGCAGGCGGTCCGCAACAAACTCA 1053582 Query 47978 ATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTG 48037 ||||| | |||| || | ||||||||| ||||| ||||| || | || | || Sbjct 1053581 ATGTACTGGCACATCAGACGGGCGTTCATGCCAATGAGCGACACCGGGAGCGCATCCGTC 1053522 Query 48038 AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACG----CGGGACTC 48093 | ||| || | ||| ||| ||||| || | |||| || ||| |||| | Sbjct 1053521 AAAAAGTCTTGCTCGATCGAGACGGCCTCGGTGATGATCTTGTTCACGGTGTCGGGGTGC 1053462 Query 48094 TGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCC 48153 | | | || ||| ||||| | || |||||| ||| |||||||| |||||| || Sbjct 1053461 -GCGCGCTTCTTG---AGGTG---GCCAAAGAGCAGGCACGCAAAGTCGGTGTGCAGACC 1053409 Query 48154 TTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTT 48213 ||||| || ||||||| |||| |||||| |||||| ||||| | || | || || Sbjct 1053408 CTCGTCACGCGAGATGAGCTCGTTCGAGAAGGCGAGACCCGGCATCAGGCCGCGCTTCTT 1053349 Query 48214 GAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 ||||| || || | || || ||||| ||||||||||||||||| || || || || || Sbjct 1053348 CAGCCAAAAGATCGAGGCAAAGGAGCCCGAGAAGAAGATGCCCTCGACCGCGGCAAAGGC 1053289 Query 48274 GGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGC 48333 ||| | ||| ||| || ||| ||| ||||||| |||||||| || || Sbjct 1053288 CACGAGGCGCTCCGAGAACGAGGCGCGGCGGTCGTTGATCCAGCGCAGCGCCCACTCGGC 1053229 Query 48334 CTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGC 48393 ||| | ||| | || || ||||| ||||| |||||| | || | | | Sbjct 1053228 CTTTTGCTTCACCACGGGGATGGTCTCGATGGCGTTGAAGAGGAAGTCGCGTTGGTCGGG 1053169 Query 48394 GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGC 48453 || | ||||| || ||| | ||| |||| ||||| | ||||| || Sbjct 1053168 CTCGCGGATGTAGGTGTCGATCAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCAT 1053109 Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513 ||||||||| ||||||||| | |||||| ||||||| || | ||||| | ||| Sbjct 1053108 GATCTGGAAACCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTCGGACGAGAAGCGCTC 1053049 Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 || || ||||| || || || || || || || |||||||| |||||||| || | | Sbjct 1053048 GAGGAGGTTCTCGTTCACGATACCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTCAC 1052989 Query 48574 GAAATGGCGCTCGTTGTGGG---TGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTC 48630 || || |||||||||| | || | | |||| | || | ||| ||| ||||| Sbjct 1052988 AAAGTGACGCTCGTTGTCCGTCATGCGGTTGTCCCAGTCGTGCAGGTCCTTGGAGAGGTC 1052929 Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 | || || | |||||||| || || || || |||||||| Sbjct 1052928 AATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 1052884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532613693440