Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 122 6e-23 seq7 118 7e-22 seq3 114 8e-21 >seq2 Length=1413755 Score = 122 bits (134), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||||||||||||||||||| |||||||| ||| | || | || Sbjct 127555 AGCACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCC 127496 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||||| || || ||||| | || | ||||||||||| Sbjct 127495 TCCAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 127436 Query 34886 TTTATTTTTTGTTTGACGGATG-CTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | | || || || ||| | |||| || | | |||||| || | || || || Sbjct 127435 TGAACCTTCGACTTCAC-AATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGT 127377 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||| ||||| | |||||| |||||| Sbjct 127376 CTTGCCAGTGAGAGTCTTGATAAAGATTTGCATG 127343 >seq7 Length=546283 Score = 118 bits (130), Expect = 7e-22 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||||| ||| ||||||||| ||||| |||||||| || |||| | || Sbjct 171943 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 171884 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || || ||||| | || | ||||||||||| Sbjct 171883 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 171824 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || | |||||| || | ||| || | Sbjct 171823 TGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCG 171766 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 |||| ||||| |||||||| || || | ||||||| Sbjct 171765 TCTTACCCGTAAGGGTCTTGACGAACACTTGCATGA 171730 >seq3 Length=1023756 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || |||| |||| Sbjct 657174 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 657115 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| |||||||| || || ||||| | || | ||||||||||| Sbjct 657114 CTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 657055 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || || |||||| || | ||| || || Sbjct 657054 CTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGT 656995 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| || ||||| ||||||| |||||| Sbjct 656994 CTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || |||| |||| Sbjct 656113 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 656054 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||| |||||||| || || ||||| | || | ||||||||||| Sbjct 656053 CTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 655994 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || | |||||| || | ||| || || Sbjct 655993 CTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTGT 655934 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGT 34983 |||||| || |||||||| ||||||| ||||| |||| Sbjct 655933 CTTTCCGGTAAGGGTCTTAACAAAGACTTGCATAGTAGT 655895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692736489904