Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq1 125 7e-24 >seq3 Length=1023756 Score = 134 bits (148), Expect = 1e-26 Identities = 362/541 (67%), Gaps = 17/541 (3%) Strand=Plus/Minus Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGA 147514 || ||| || || ||||| ||||| ||||| ||||| || |||| |||||||| | | Sbjct 987547 CAGGGCAATCGAGGCCAGGTTGCACACGGCGGTCTCATCCGGCGA-GCTGTACTCGATAA 987489 Query 147515 TTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574 | || | ||||||||| | || || || |||| || | ||| ||||| || || | Sbjct 987488 TCTCCGTGCACAGGTTCGACGACTTGATCACACCCACGTTCTTCTGGTTGCTCTTGCGGT 987429 Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA 147634 || || || ||| |||| || | || || ||||||| |||| |||| || Sbjct 987428 TGGCAGCATCCTTGTAGAGAATAAAGGGGGTACCCGTCTCGATCTGCGCCTCAAGGACCG 987369 Query 147635 ACCTATGC-AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGC 147693 | || || | |||||| ||| | || |||||||||| ||||| ||| Sbjct 987368 -CGTACCAGAGCTTCTGCGCCTTGACCGTACGACGGCCGCGGCCCTCGCGCTCGTAGCGC 987310 Query 147694 TCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGA 147753 ||||| | | ||| ||||| ||||||||||| || || ||||| || |||| || Sbjct 987309 TCGTAGAGCTCCTCGAACTCCTCGCCGTAGCAGTCCGCGAGGCCAGGGCACTCGGCAGGG 987250 Query 147754 CACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCAC 147813 |||||||||| ||| | || | || || ||| |||||||| || ||||| Sbjct 987249 CACATCAGCGTCCAGTCACCACCCTGCTCGACACGCTTCATGAACAGATCAGGGACCCAT 987190 Query 147814 AGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGC--GCCCATGTTGCGTTTC--AA 147869 || ||||| | ||| |||||||| | | |||| | || || | | || | | Sbjct 987189 AGGGCGTAGAAAAGGTCGCGCGC---ACGAACCTCCTCCTTACCGTGGTTC-TTGCGGAG 987134 Query 147870 ATTAA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTT 147928 | || | || | | ||| ||| | |||||| || |||| ||| | ||| | |||||| Sbjct 987133 GTCAATGAACTC-AAAGACGTCCGAGTGCCACGGCTCAAGGTAAATGGCAAACGCACCAG 987075 Query 147929 TACGC---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGG 147985 ||| || || ||||||||||||| ||| || ||||||| |||| || | ||||| Sbjct 987074 GGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCCGTGTTGTTGTACACACGGAGCATGG 987015 Query 147986 G 147986 | Sbjct 987014 G 987014 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||||| |||| || | | ||||| || || |||||||||||||||| || Sbjct 657183 ACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGT 657124 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| |||||||| || |||| | |||| || |||||||| || ||||| ||||| Sbjct 657123 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCC 657064 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || || | | || | || || | | ||| || |||| Sbjct 657063 CTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAG 657004 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| ||||| || ||||| || | || | |||||| Sbjct 657003 GGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| || || ||| |||||||| || |||| | Sbjct 656094 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCA 656035 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||| ||||||||||| || ||||| || || || || || Sbjct 656034 AAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 655994 >seq1 Length=1557178 Score = 125 bits (138), Expect = 7e-24 Identities = 331/496 (67%), Gaps = 37/496 (7%) Strand=Plus/Plus Query 46774 AAAAGGCCCAGTGGGCCATGAAGTGGATCGA-GAGCGAGACCGCCACGCTGGCCGAGCGC 46832 |||||||| ||||||| || |||||| | || || | ||| || | | |||||| Sbjct 1053224 AAAAGGCCGAGTGGGCGCTGCGCTGGATCAACGACCGCCGC-GCCTCGTTCTCGGAGCGC 1053282 Query 46833 ATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTT 46892 | ||||| || || ||||| ||| | || || |||||| |||||| | || ||| Sbjct 1053283 CTCGTGGCCTTTGCCGCGGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCCTCGATCTTT 1053342 Query 46893 TACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGC 46952 | | || | ||| | |||||||| || | ||| |||||| | |||||||| Sbjct 1053343 TGGCTGAAGAAGCGCGGCCTGATGCCGGGTCTCGCCTTCTCGAACGAGCTCATCTCGCGT 1053402 Query 46953 GACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTA--------CAAGACGCGCGTG 47003 ||||| || || ||||| ||||||||||| || || || ||||| ||||| | Sbjct 1053403 GACGAGGGTCTGCACACCGACTTTGCGTGCCTGCTCTTTGGCCACCTCAAGAAGCGCGCG 1053462 Query 47004 AATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGG---GAGGCGGTGAGCATC 47060 | | | ||||| | ||| || | | | ||||| || ||| Sbjct 1053463 CA------------CCCCGACAC---CGTGAACAAGATCATCACCGAGGCCGTCTCGATC 1053507 Query 47061 GAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT 47120 || | || ||||| || | ||||| || || | | | ||||||||||| | |||| Sbjct 1053508 GAGCAAGACTTTTTGACGGATGCGCTCCCGGTGTCGCTCATTGGCATGAACGC-CCGTCT 1053566 Query 47121 -ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGA 47178 |||||| | || ||||||||||| ||||| || ||| | || |||||| |||| ||| Sbjct 1053567 GATGTGCCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTCGCGCTCGG-CAACTCGA 1053625 Query 47179 AATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAA 47236 | | | || |||| || || || || |||||| | ||||| |||||| ||||||| Sbjct 1053626 AGCACTACAA--CTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAA 1053683 Query 47237 AACCAATTTTTTCGAG 47252 | || ||||||||| Sbjct 1053684 GTCGAACTTTTTCGAG 1053699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611104677760