Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 300 2e-76 seq5 150 2e-31 seq1 145 8e-30 >seq3 Length=1023756 Score = 300 bits (332), Expect = 2e-76 Identities = 536/770 (70%), Gaps = 12/770 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC--TACACGCGTGTCCGTGAGACGTA 53250 ||||||| || || | ||||||||||| |||| | | ||| | || |||| || Sbjct 986706 TCATGCGTGTTGCTGTCGGTATCCACGGCACCGACGTTGCGAGCGCGATCG--AGACCTA 986763 Query 53251 CGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 | || | ||| | ||| ||||||||||||| |||| || || |||||||| ||||| Sbjct 986764 CAACATGATGTCGGAGAAGGCCTTTACGCACGCCTCGCCGACTCTCTTCAACGCCGGTAC 986823 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 |||| ||||||||| |||||||||||| |||||||| |||||||| || || Sbjct 986824 ACCGAACCCCCAGATGTCGTCGTGCTTCCTGGTGTGCATGAAGGACGACTCGATTGAGGG 986883 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 ||| ||||| ||||||||| ||| || || |||| | | |||||||||||| | Sbjct 986884 CATTTACGACACGCTCAAGTCGTGCGCGATGATTAGCAAGACGGCCGGTGGTATCGGTCT 986943 Query 53431 CCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 | || | | |||||| | ||| | || || |||||||| || | | Sbjct 986944 CAACATCCACTGCATCCGTGGTACCGGTTCGTACATTGCCGGCACGAACGGTGTTAGCAA 987003 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || ||| | || |||||||| || | ||||||||||||||| || ||| |||||||||| Sbjct 987004 CGGTATCATTCCCATGCTCCGTGTGTACAACAACACGGCCCGCTATGTCGACCAGGGTGG 987063 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 |||||| || |||| ||||| ||||| |||||||||||| | ||| | | || Sbjct 987064 CAACAAGCGCCCTGGTGCGTTTGCCATTTACCTTGAGCCGTGGCACTCGGACGTCTTTGA 987123 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668 ||| | || || || ||| || ||| | || ||| | || ||| || ||||| || | Sbjct 987124 GTTCATTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTTCG-TGCGCGCGACCTTTTCT 987182 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || || ||| | || || || |||||| | || ||| ||| | || ||| Sbjct 987183 AC-GCCCTATGGGTCCCTGATCTGTTCATGAAGCGTGTCGAGCAGGGTGGTGACTGGACG 987241 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 ||||||||||| ||||||||| |||||| || |||||| |||||||| | ||| Sbjct 987242 CTGATGTGCCCTGCCGAGTGCCCTGGCCTCGCGGACTGCTACGGCGAGGAGTTCGAGGAG 987301 Query 53789 ATGTATCGGACG-TACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGG 53846 | || || || |||| || | |||||||| | | ||||||||||| || Sbjct 987302 CTCTA-CGAGCGCTACG-AGCGCGAGGGCCGCGGCCGTCGTACGGTCAAGGCGCAGAAGC 987359 Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906 | ||| | || |||| || ||| | |||||||| || || | || |||||||| Sbjct 987360 TCTGGTACGCGGTCCTTGAGGCGCAGATCGAGACGGGTACCCCCTTTATTCTCTACAAGG 987419 Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCG 53956 || | | |||| |||||||||||||||||| | || || ||||| ||| Sbjct 987420 ATGCTGCCAACCGCAAGAGCAACCAGAAGAACGTGGGTGTGATCAAGTCG 987469 Score = 149 bits (164), Expect = 7e-31 Identities = 316/463 (68%), Gaps = 23/463 (5%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 || || |||||||| |||||| | ||||| ||||| || ||||||||| ||||||| | Sbjct 987977 GGTCTGCGCAACTCGCTGCTCCTCGCGCCGATGCCGACTGCGTCGACGAGTCAGATCCTC 988036 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||| ||||||| |||||||| ||||||| |||||| ||| ||||||| || || Sbjct 988037 GGCTTCAACGAGTGCTTCGAGCCTTACACGAACAACATTTACATGCGCCGCGTGCTTGCC 988096 Query 55598 GGTGAGTTT---GTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAG 55654 |||||||| || ||| | | || ||| | || | || || | | Sbjct 988097 GGTGAGTTCCAGGTGGTGAACCCCTGGCTGCTCCGCGAGCTTGTCGAGCAGGGCCTC--- 988153 Query 55655 TGGAACCCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTG 55711 |||||| | ||| ||| || || |||| | |||| || || ||||||| | Sbjct 988154 TGGAACGAGGCGATGAAGCAGCGCATCATTGCCC---ACGGTGGTTCGATCCAGAACGTC 988210 Query 55712 ---GAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAG 55768 | || || ||| |||||| | | ||| |||||||||||||||| || ||| Sbjct 988211 CCCGGTATCCCCGACCGTATCAAGGCGCTCTACAAGACGGTGTGGGAGATTAGCCAAAAG 988270 Query 55769 AGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC 55828 | || |||||| ||| || ||||| |||| |||| ||| |||| ||| ||| Sbjct 988271 GTGATTATCGACATGGCTGCGGACCGTGGCGCGTTCATCTGTCAGAGCCAGAGTCTCAAC 988330 Query 55829 AT---CTTCATGGAGAAT-CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTG 55884 || | ||| | | |||| |||||| || | ||||||||||| ||||| || Sbjct 988331 ATTCACCTCAGTGCGCCGACCTT---TGGCCAGCTT-ACTTCGATGCACTTCTACGGCTG 988386 Query 55885 GAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGACCCGC 55927 ||||||||| |||||||| || | |||||| ||||| || ||| Sbjct 988387 GAAGAAGGGTCTCAAGACCGGCACGTACTACCTGCGCACTCGC 988429 >seq5 Length=737206 Score = 150 bits (166), Expect = 2e-31 Identities = 309/454 (68%), Gaps = 8/454 (2%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| || |||||||| |||| || | || | | ||||||||| || ||||| || Sbjct 400784 CCAGTGCCAATACCCTCGCCACCGTTAAGGAGGACCTGCGGCACGACGGGGACGTACCAC 400725 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | || ||||| || ||| ||||||| |||| ||| | ||| Sbjct 400724 TCGGGCTCGATACTCTGGCCATCGTCGTCGAGGTAGTTGAGCAGTGCATCGTCCTTTGGA 400665 Query 117272 TCGAATAT---GTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 ||| | | | | | | ||| | || || | || || ||||| | ||| || Sbjct 400664 CTGAACAGAGCGCGCGTAATTCCCGGCAC-AGCCG--TAAAGATATAACGGGCGCTGGCG 400608 Query 117329 GCATCCTTGCCACC-AGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 || |||||||| || | | || |||||||| || || || | ||| ||||||||||| Sbjct 400607 GCGTCCTTGCCGCCCATCGAG-CGCGTACCAAACTGACCGTTAGGCGACAAGAGGTTCAC 400549 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 ||||||| || ||||| ||| || | | ||| ||||| | ||| || ||||| Sbjct 400548 GTTGTTGCTTCCGCAAAAGTCTTGCGCGAGGCCGACGATCGTCGCCGAGAGACTTGCCTC 400489 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC 117507 || ||||| || || || ||||||| ||||| ||| ||||| |||||| || || Sbjct 400488 GCCGTGGTGGTAGGCAGTGTGCTCCGAGACGTAACCCTGGAGCTGCTGCACCTTGATCTC 400429 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 | | | || || ||||| |||| || | | ||| |||||||| | ||||| || || Sbjct 400428 GGTCTTGAGCTTGCGCTTGAAGCAGCCAAAGAGCACTTTGCGCTGGCCGGGCTTTAGTCC 400369 Query 117568 ATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 || |||| |||||||| || || ||||| Sbjct 400368 GTCGACCACCGACGGGATCGAGCGGATGTTGTCC 400335 Score = 132 bits (146), Expect = 5e-26 Identities = 241/346 (70%), Gaps = 10/346 (3%) Strand=Plus/Minus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| | || ||||||||||||||| ||||||| ||| |||||||||||||||||| Sbjct 399906 GTTGATAATCAGGCCCTTGATGTGCGAGCCGTCAAAGTCCTGGTCGGTCATGATCATCAG 399847 Query 152829 ACGA-CCGTAGCGCAGGTCACGTAGTGACC----CGTAGACCTTTCCATGTTGAAGCCCG 152883 ||| ||||| |||| || ||| ||||| |||| ||| || || || || || Sbjct 399846 -CGAGCCGTACCGCAA-TC-CGT--TGACCGAGTCGTACTGCTTGCCGTGCTGGAGACCA 399792 Query 152884 AGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCC 152943 ||||||| ||||| ||| | || | || | | | | | ||| || || Sbjct 399791 AGGATCTCTTTGATGTTCTTGATCTCGGCGTTCTTCCTAATCGCGTCGTGCGTCGCCTCG 399732 Query 152944 CGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAACG 153003 || ||||| || |||| || || || || ||||| ||| |||| | |||||| || || Sbjct 399731 CGCACATTCAGCAGCTTACCACGCAGCGGGAACACACCGTACGCATCGCGGCCGACCTCG 399672 Query 153004 CTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAG 153063 ||||| || | | || || || || ||||||||||| || |||| || ||||| || Sbjct 399671 CTCAGGCCCGAGACTGCGAGCGCCTTGGCCGAGTCACCTTCCGTGAGGATGAGCGTGCAC 399612 Query 153064 TCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 ||| || | || |||||||||||||| || ||||||| Sbjct 399611 TCGGCGCTGCGCTTGCCGCCCGCCCAGTTGGCGTCCTCGAGCTTGG 399566 Score = 120 bits (132), Expect = 3e-22 Identities = 226/330 (68%), Gaps = 2/330 (1%) Strand=Plus/Minus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || |||||||| || || ||||| | ||| ||||||||||||||||| ||||||| Sbjct 399896 AGGCCCTTGATGTGCGAGCCGTCAAAGTCCTGGTCGGTCATGATCATCAGCGAGCCGTAC 399837 Query 118073 CGTAAATCTCTCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132 || || | | | |||| || ||| || || ||||| || ||||||| ||| | | Sbjct 399836 CGCAATCCGTTGACCGAGTCGTACTGCTTGCCGTGCTGGAGACCAAGGATCTCTTTGATG 399777 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATG-GTGGCGTCCCGAACGTTGCGCGG 118191 || | || | || | | | | | | | || || || || || || || || | Sbjct 399776 TTCTTGATCTCGGCGTTCTTCCTAATC-GCGTCGTGCGTCGCCTCGCGCACATTCAGCAG 399718 Query 118192 CTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAAT 118251 |||||| ||||| || ||||| || || || ||||| || |||||| ||| | | Sbjct 399717 CTTACCACGCAGCGGGAACACACCGTACGCATCGCGGCCGACCTCGCTCAGGCCCGAGAC 399658 Query 118252 AGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGATG 118311 || || ||||| ||||||||||| || || | || || |||||||||| |||||| | Sbjct 399657 TGCGAGCGCCTTGGCCGAGTCACCTTCCGTGAGGATGAGCGTGCACTCGGCGCTGCGCTT 399598 Query 118312 AGTACCGGCCCAATTAGCATCATCCAGCTT 118341 || ||||| || || || || ||||| Sbjct 399597 GCCGCCCGCCCAGTTGGCGTCCTCGAGCTT 399568 >seq1 Length=1557178 Score = 145 bits (160), Expect = 8e-30 Identities = 328/487 (67%), Gaps = 16/487 (3%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGAT---GGCA 74846 || ||||| || | || || ||||| || || |||||||||| ||||||||| |||| Sbjct 1053389 TCGTTCGAGAAGGCGAGACCCGGCATCAGGCCGCGCTTCTTCAGCCAAAAGATCGAGGCA 1053330 Query 74847 CAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCG 74906 ||||| || |||||||||||| ||||| |||||||| || ||||| | || | Sbjct 1053329 ---AAGGAGCCCGAGAAGAAGATGCCCTCGACCGCGGCAAAGGCCACGAGGCGCTCCGAG 1053273 Query 74907 AAC--GGTGCATCGGAAG-TCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA 74963 ||| || || ||| | | ||||| | | ||||| || || ||| | || ||| | Sbjct 1053272 AACGAGGCGCGGCGGTCGTTGATCCAGCGCAGCGCCCACTCGGCCTTTTGCTTCACCACG 1053213 Query 74964 GGGACAGTATCGATCGCTTGGAAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCT 75021 |||| || ||||| || | ||||||| | || | | ||||| || || | Sbjct 1053212 GGGATGGTCTCGATGGCGTTGAAGAGGAAGTCGCGT--TGGTCGGGCTCGCGGATGTAGG 1053155 Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 |||| |||| || ||||| |||||||| || || ||| | | |||| | ||| Sbjct 1053154 TGTCGATCAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGT 1053095 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCA 75141 |||| | || ||||| || ||| || || || || | | || ||||| Sbjct 1053094 AGAAGCAGCGGGCCTCGGCGGCCTGCACCTCGGACGAGAAGCGCTCGAGGAGGTTCTCGT 1053035 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCAT 75201 | ||||| |||||||| ||||| || || || || || | | |||||| ||||| | Sbjct 1053034 TCACGATACCGTCCGACGCGGCAAAGAACGCAAGGACGTGGCTCACAAAGTGACGCTCGT 1052975 Query 75202 CGTCAG---TGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCG 75258 ||| | || | |||||||| || | ||||||| | | |||||||||||| | | Sbjct 1052974 TGTCCGTCATGCGGTTGTCCCAGTCGTGCAGGTCCTTGGAGAGGTCAATCTCCTCGGCGG 1052915 Query 75259 TCCAGAA 75265 ||||||| Sbjct 1052914 TCCAGAA 1052908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215890556800