Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 6e-16 seq3 86.0 4e-12 >seq2 Length=1413755 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/208 (72%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||||||||||| |||||||| || || || || || || |||| || || || Sbjct 127546 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGC 127487 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || || |||||||||||||| || | ||||||||||| ||| | || Sbjct 127486 TTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC-CTGAACCTT 127428 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCT---CTCCACTTCCACGGTTATCGTTTTACC 34679 | || || || || ||| ||||| ||| || |||| || ||||| || || Sbjct 127427 CGACTTCACAATGTCGATCGTG---TCGCTAGACTCGACCTCCAGAGTGATCGTCTTGCC 127371 Query 34680 GGTTAACGTTTTCACAAAAATCTGCATG 34707 || | || || | ||| || |||||| Sbjct 127370 AGTGAGAGTCTTGATAAAGATTTGCATG 127343 >seq3 Length=1023756 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| ||||| || || || |||||| || ||||| || || || || || Sbjct 657179 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGG 657120 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || |||||||| || | |||||||||||||| || | |||||| Sbjct 657119 CCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCC 657060 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | ||| ||||| | ||| || || | ||| Sbjct 657059 TTGTCCTGGATC-TTGGCCTTGACGTTCTCAATCGTGTCCGAGGACTCGACCTCGAGGGT 657001 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||||| || | || || ||||| | |||||| Sbjct 657000 GATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729538627728