Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq7 102 7e-17 seq3 95.1 1e-14 >seq2 Length=1413755 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 ||||||||| || ||| | || ||||| || |||||| | || ||||| || || || | Sbjct 127340 CGCCATGCAAATCTTTATCAAGACTCTCACTGGCAAGACGATCACTCTGGAGGTCGAGTC 127399 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 |||| |||| || || || || || |||| ||||| || ||||| || || || Sbjct 127400 TAGCGACACGATCGACATTGTGAAGTCGAAGGTTCAGGACAAGGAGGGCATTCCTCCGGA 127459 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 |||||||| || || | ||||||||| || |||| ||| | ||| | || || || Sbjct 127460 CCAACAGCGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTA 127519 Query 27164 CAACATTCAAAAGGAG 27179 ||||||||| |||||| Sbjct 127520 CAACATTCAGAAGGAG 127535 >seq7 Length=546283 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| | || || || || || || || ||| | ||||| || || || || | Sbjct 171728 CGTCATGCAAGTGTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTCGAGTC 171787 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | || |||| ||||| || || || ||||| || ||||| || || || Sbjct 171788 TTCGGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGA 171847 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 |||||||| | || | ||||||||| || | || ||| | || |||| || || Sbjct 171848 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTA 171907 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| || |||||||||||| | || |||| | || |||| ||||| Sbjct 171908 CAACATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCGCCTGCGTGGTGG 171958 >seq3 Length=1023756 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||| | ||||| || ||||| || || ||| | || || || || || || | || Sbjct 656962 ATGCAGGTCTTTGTCAAGACTCTTACGGGTAAGACGATCACCCTCGAGGTCGAGTCCTCG 657021 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||||| ||||| || || || ||||| || ||||| || || || ||| Sbjct 657022 GACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 657081 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| || | || || | || | ||| |||||| Sbjct 657082 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAAC 657141 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || |||| |||| | || ||||| || Sbjct 657142 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTCCGTGGTGGTAT 657191 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| | ||||| || || || ||||| ||| | || || || || || || | || Sbjct 655901 ATGCAAGTCTTTGTTAAGACCCTTACCGGAAAGACAATCACCCTCGAGGTCGAGTCTTCG 655960 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||||| ||||| || || || ||||| || || || || || || ||| Sbjct 655961 GACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 656020 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||| || | || || | || | ||| |||||| Sbjct 656021 CAGCGTCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAAC 656080 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || || ||||||||||| | || |||| |||| Sbjct 656081 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 656115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918313016320