Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 145 5e-30 seq7 134 1e-26 seq3 131 1e-25 >seq2 Length=1413755 Score = 145 bits (160), Expect = 5e-30 Identities = 161/213 (76%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| |||||||||||||| || |||||||| || | ||| || |||| || Sbjct 127553 CACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTC 127494 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||| |||||||| ||||| || || | ||| | || ||||| ||| Sbjct 127493 CAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 127434 Query 44248 TATCTTCTGCTTCA--ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 | |||| ||||| |||| | || |||||| || || ||||||| || |||||| Sbjct 127433 AACCTTCGACTTCACAATGT--CGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTC 127376 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| ||||| | |||||||||||| Sbjct 127375 TTGCCAGTGAGAGTCTTGATAAAGATTTGCATG 127343 >seq7 Length=546283 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || |||||| ||||||||||| || | || ||| |||| || Sbjct 171941 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTC 171882 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||| || || | ||| | || ||||| ||| Sbjct 171881 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 171822 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| | || || ||||| | ||||||||||| Sbjct 171821 GATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACCTCGAGGGTAATCGTCTT 171762 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 ||||| |||||||| ||||| | |||||||| Sbjct 171761 ACCCGTAAGGGTCTTGACGAACACTTGCATGA 171730 >seq3 Length=1023756 Score = 131 bits (144), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||||||| ||||| |||||| ||||||||||| ||| || ||| | || Sbjct 656113 CAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATC 656054 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| ||||||||||||| |||||| || || | ||| | ||| ||||| || Sbjct 656053 CTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTC 655994 Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 | ||||| || | | |||| | || ||||| | || || ||||| | || || | Sbjct 655993 CTGGATCTT-GGCCTTGACGTTCTCAATCGTGTCCGAAGACTCGACCTCGAGGGTGATTG 655935 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || |||||||| || |||| |||||| Sbjct 655934 TCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 655901 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | || ||||||||| ||||| |||||| ||||||||||| || Sbjct 657192 CATACCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 657133 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||| ||||||||||||| ||||| || || | Sbjct 657132 GCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGG 657073 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| ||||| || | | |||| | || ||||| | ||| | Sbjct 657072 AGGAATGCCCTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCAATCGTGTCCGAGGACT 657014 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | || |||||||| ||||| || ||||| || |||| ||||| Sbjct 657013 CGACCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990329801872