Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 147 5e-30 seq3 145 2e-29 seq2 95.1 3e-14 >seq7 Length=546283 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || ||||| ||||||||||| || || ||| Sbjct 171735 CAAGTGTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTCGAGTCTTCGGAC 171794 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| ||||| ||||| |||||||| || || || ||||||||||| || Sbjct 171795 ACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 171854 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | |||||| | || || ||| || Sbjct 171855 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAACATC 171914 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 171915 CAGAAGGAGTCGACCCTTCACCTGGT 171940 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || || ||||||||||| || || || ||||| || || || Sbjct 270352 AAGATCCAGGACAAGGAGGGKATTCCTCCGGACCAACAGCGCCTGATCTTTGCGGGCAAG 270293 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||||||||| || |||| || ||| ||||| |||| || || || || ||||| Sbjct 270292 CAGCTCGAAGACGGGCGGACGCTCAGCGACTATAATATCCAGAAGGAGTCGACCCTGCAC 270233 Query 178125 CTTGT 178129 || || Sbjct 270232 CTCGT 270228 >seq3 Length=1023756 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 || || || ||||| || || || ||||||||||||||||| || ||| ||||| || Sbjct 656971 TTTGTCAAGACTCTTACGGGTAAGACGATCACCCTCGAGGTCGAGTCCTCGGACACGATT 657030 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 ||||||||||| ||||| |||||||| || || || ||||||||||| || || || Sbjct 657031 GAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAGCGCCTG 657090 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| ||||| || |||||||| ||||| | || || ||| || ||| |||| || Sbjct 657091 ATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAACATCCAGAAG 657150 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || ||||| || || Sbjct 657151 GAGTCGACGCTGCACCTGGT 657170 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | || || || || || || ||||| || |||||||||||||| || || ||| Sbjct 655904 CAAGTCTTTGTTAAGACCCTTACCGGAAAGACAATCACCCTCGAGGTCGAGTCTTCGGAC 655963 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||||||||| ||||| |||||||| || || || ||||||||||| || Sbjct 655964 ACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAACAG 656023 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 656024 CGTCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTACAACATC 656083 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 656084 CAGAAGGAGTCGACGCTGCACCTGGT 656109 >seq2 Length=1413755 Score = 95.1 bits (104), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| || | || |||||||| || || |||||||| || ||||| || ||| Sbjct 127347 CAAATCTTTATCAAGACTCTCACTGGCAAGACGATCACTCTGGAGGTCGAGTCTAGC--- 127403 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| | || || ||| |||||||||| || || || ||||||||||| Sbjct 127404 GACACGATCGACATTGTGAAGTCGAAGGTTCAGGACAAGGAGGGCATTCCTCCGGACCAA 127463 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||||||||| || ||||| || || || | || || | || || ||| Sbjct 127464 CAGCGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 127523 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || || || || || || ||||| Sbjct 127524 ATTCAGAAGGAGAGCACGCTCCACCTTGT 127552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730953235104