Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20japonica_20[genbank_20GCA_5F001600795.1_202016-03-01] 16 sequences; 8,364,631 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2 167 2e-36 seq7 154 1e-32 seq3 149 6e-31 >seq2 Length=1413755 Score = 167 bits (184), Expect = 2e-36 Identities = 168/213 (79%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || ||||||||||||||||||||||| ||||| |||||||| || |||| || Sbjct 127553 CACAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGGCCGTCCTC 127494 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||||||||| |||| ||||||||||||| |||| || |||||||||| | Sbjct 127493 CAGCTGCTTGCCGGCGAAGATCAACCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC-T 127435 Query 41773 GATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 || || | |||| || | | | | |||||||| ||||| ||||||| || ||||| Sbjct 127434 GAACCTTCGACTTC-ACAATGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATCGTC 127376 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || ||||| | || || |||||| Sbjct 127375 TTGCCAGTGAGAGTCTTGATAAAGATTTGCATG 127343 >seq7 Length=546283 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || || ||||||||| ||||| ||||| || Sbjct 171958 CCACCACGCAGGCGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 171899 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||| Sbjct 171898 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 171839 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||| | | | ||||| ||||| ||| Sbjct 171838 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGACTCGACC 171779 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || ||||| |||||||| || ||||| ||||| | |||||| Sbjct 171778 TCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAACACTTGCATG 171731 Score = 122 bits (134), Expect = 8e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 ||||||| || || || | || || ||||| || ||||||||| || ||||||||| Sbjct 270208 CGCCGCCACGCAGGCGGAGGACGAGGTGCAGGGTCGACTCCTTCTGGATATTATAGTCGC 270267 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||| || ||| |||| |||||||||||||| || || ||||||||||||||||||| | Sbjct 270268 TGAGCGTCCGCCCGTCTTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGAG 270327 Query 41754 GAACGCTCTCCTTGTCCATGATTTT 41778 ||| | |||||||||| ||| || Sbjct 270328 GAATMCCCTCCTTGTCCTGGATCTT 270352 >seq3 Length=1023756 Score = 149 bits (164), Expect = 6e-31 Identities = 173/231 (75%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| |||||||| ||||||||| ||||| |||||| Sbjct 657188 CCACCACGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 657129 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||||||||| || ||||||||||||||||||| ||| Sbjct 657128 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGAGGA 657069 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTC 41811 | || |||||||||| ||| || ||| |||| | || ||||| ||||| Sbjct 657068 ATGCCCTCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATCGTGTCCGAGGACTC 657013 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || ||||| |||||||| || ||||| || || | |||||| Sbjct 657012 GACCTCGAGGGTGATCGTCTTACCCGTAAGAGTCTTGACAAAGACCTGCAT 656962 Score = 120 bits (132), Expect = 3e-22 Identities = 163/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 41642 CGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTG 41701 || || || | |||||| |||||||| ||||||||| ||||| |||||| || ||| Sbjct 656121 CGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 656062 Query 41702 CGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTC 41761 || | || ||||||||||||||||| || ||||| ||||||||||||| |||| | | Sbjct 656061 CGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCC 656002 Query 41762 TCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTC 41817 ||||||||| ||| || ||| |||| | || ||||| ||||| ||||| Sbjct 656001 TCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATCGTGTCCGAAGACTCGACCTC 655946 Query 41818 CACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || || || || ||||| || || | ||||| Sbjct 655945 GAGGGTGATTGTCTTTCCGGTAAGGGTCTTAACAAAGACTTGCAT 655901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303907539200