Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq31 123 3e-23 >seq31 Length=72577 Score = 123 bits (136), Expect = 3e-23 Identities = 300/452 (66%), Gaps = 2/452 (0%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| |||| | || || || |||||| || || |||||||| | || Sbjct 17208 TTCAGGTGGCTAAAGAGGAGGCAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATG 17267 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || ||||| || || | | || ||||| || || ||||| | |||||| |||| Sbjct 17268 AGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGAC 17327 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 ||||| || ||||| || || |||||||| || | ||||||||| | | || |||| | Sbjct 17328 GCAAACGAACCCGAGAAAAAGATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTCCGAG 17387 Query 16361 TACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACA 16419 ||| ||| || | ||| ||||| | | |||| ||||| ||||| || | Sbjct 17388 AACGAGGCACGCTTGTC-CGAGATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGAC 17446 Query 16420 ATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGT 16479 ||||| || || || ||||| | | ||| | || || || || || Sbjct 17447 GGGGATCGTCTCGATCGCATTAAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGT 17506 Query 16480 ATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATA 16539 || ||||| | |||| |||| ||||| |||||||| || |||||||| || || Sbjct 17507 GTCGATCAGGAGCGAGTACGTTTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTA 17566 Query 16540 GAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATT 16599 ||||| || ||||| || || || || || ||| || || ||||||||||||| Sbjct 17567 AAAGCAGCGGGCCTCGGCCGCCTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATT 17626 Query 16600 CACGATACCGTCACTTGCAGCAAAAAACGCCA 16631 ||||| || || || ||||| ||||||| Sbjct 17627 GACGATGCCATCCGAGGCGGCAAAGAACGCCA 17658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413792695400