Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq31 432 4e-116 seq44 131 2e-25 seq70 118 1e-21 >seq31 Length=72577 Score = 432 bits (478), Expect = 4e-116 Identities = 613/852 (72%), Gaps = 15/852 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||| ||| |||||| || || || ||||||| || | |||| || Sbjct 17845 GAGCCGCTCCTGAAGGAGAACAAGTCGCGCTTTGTCCTTTTCCCTATTCGCTACCACGAG 17786 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| ||||||||||||| || ||| |||||||| Sbjct 17785 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACCGCTGAAGAGATGGACCTG 17726 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || ||| | ||||||||| | || |||||||||| |||||||| || | | Sbjct 17725 TCGAAAGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGAGC 17666 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG- 116811 ||||| ||||| || || |||||| || ||||||||||| ||||| ||||||||||| Sbjct 17665 CACGTCCTGGCGTTCTTTGCCGCCTCGGATGGCATCGTCAATGAGAACCTGGTCGAGCGC 17606 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| ||||||||| || ||||| |||||||||||||| || Sbjct 17605 TTTAGCGCCG-AGGTGCAGGCGGCCGAGGCCCGCTGCTTTTACGGCTTTCAGATTATGAT 17547 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||||| ||| ||| ||| |||||||| ||| | || | | Sbjct 17546 GGAGAACATTCACTCGGAAACGTACTCGCTCCTGATCGACACCTACATCCG---TGAGCC 17490 Query 116932 GGAGAAGCTCCGTT---TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 |||| ||| | | | || || || ||||||||||| || |||||| | ||||| Sbjct 17489 GGAGCAGCGCGAGTATCTCTTTAATGCGATCGAGACGATCCCCGTCGTCAAGCAAAAGGC 17430 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||| ||||| |||||||||||| | | || || | ||| | ||| |||||||| |||| Sbjct 17429 CGACTGGGCCCTGCGCTGGATCTCGGACA-AGCGTGCCTCGTTCTCGGAGCGCCTTGTGG 17371 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || ||||| ||||| |||| || ||||| || || | || || ||||||| Sbjct 17370 CTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTTGCGTCGATCTTCTGGCTCA 17311 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || |||||||||||||||||| | ||| ||||||||||| || | ||||| | Sbjct 17310 AGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGACGAAG 17251 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCGAGCGCG 117226 ||||||| |||||||||||| | || || | || || | |||| || | | || Sbjct 17250 GTCTGCACACCGACTTTGCCTGCCTCCTCTTTAGCCACCTGAAGAAGCGCGCCCACCCCG 17191 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | | || | ||| | || || || || ||||| |||||| ||| | ||||| Sbjct 17190 ACAC-AGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGAC 17132 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 || ||||| || ||| | || | || | ||||| || ||||| ||||| Sbjct 17131 GCTCTGCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTGCCAGTACATTGAGTTT 17072 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || |||||| | ||||| || | || | | | | |||||||||||| || | || || Sbjct 17071 GTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAACTCGACGAATCCC 17012 Query 117407 CTGGACTTTATG 117418 | ||||||||| Sbjct 17011 TTTGACTTTATG 17000 >seq44 Length=593318 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| | || || ||| || | Sbjct 378155 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTCA 378096 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||| |||||| ||||||| Sbjct 378095 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 378036 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| || ||||| | |||||||||| Sbjct 378035 CAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACAAC 377976 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 377975 ATTCAGAAGGAGAGCACCCTGCACCTCGTG 377946 >seq70 Length=538529 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| | || || || | || Sbjct 174155 ATGCAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 174096 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| |||||| ||||||| Sbjct 174095 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 174036 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| || | ||||| || | |||||||||| Sbjct 174035 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 173976 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| ||| || || || ||| Sbjct 173975 ATCCAGAAGGAGAGCACTCTTCACCTTGTG 173946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218588177200