Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq31 147 2e-30 seq44 109 5e-19 seq70 100 2e-16 >seq31 Length=72577 Score = 147 bits (162), Expect = 2e-30 Identities = 250/364 (69%), Gaps = 19/364 (5%) Strand=Plus/Minus Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001 |||||||| ||| |||| ||||| | |||||| | |||||||||||||||||| || Sbjct 17296 ATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGACGAAGGTCTGCACACCGAC 17237 Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGGACGCGCCCACC------ 45055 |||||||||||| || || | | | ||| | |||||||||| Sbjct 17236 TTTGCCTGCCTCCTCTTTAG---------CCACCTGAAGAAG--CGCGCCCACCCCGACA 17188 Query 45056 --GTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTC 45113 || ||| ||| | | || || |||||||| ||| ||| ||||| | || |||| Sbjct 17187 CAGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCTC 17128 Query 45114 TGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCG 45173 |||||| ||| || | || |||||||| ||||| | |||||||||||||||| | Sbjct 17127 TGCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTGCCAGTACATTGAGTTTGTGG 17068 Query 45174 CCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTATACTGAGAACCCATTCG 45233 |||| ||||| |||||| | | | || ||| ||| | | ||| || || | Sbjct 17067 CCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAACTCGACGAATCCCTTTG 17008 Query 45234 AGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCG 45293 | |||||| | || |||||| || ||||||| | || ||||| ||| ||||||| || Sbjct 17007 ACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTCGCCG 16948 Query 45294 AATA 45297 | || Sbjct 16947 ACTA 16944 >seq44 Length=593318 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||||||| || || ||||||||||| || || ||| | Sbjct 377964 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAA 378023 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| |||||||| || || || || || ||||||||||| || || || || | Sbjct 378024 GATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 378083 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | | || ||||| | || | ||| ||||| |||||||| || || Sbjct 378084 GTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 378143 Query 118727 AAAAATCTGCATGGC 118741 || || |||||||| Sbjct 378144 GAAGATTTGCATGGC 378158 >seq70 Length=538529 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| ||||||| |||||| |||||| ||||| || || || | Sbjct 173964 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAA 174023 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || ||||| || || || || || ||||||||||| || || || || | Sbjct 174024 GATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 174083 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||| ||||| | ||| | ||| || |||||||| || || || Sbjct 174084 CTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGAC 174143 Query 118727 AAAAATCTGCATGGC 118741 || | |||||||| Sbjct 174144 GAACACTTGCATGGC 174158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829897705740