Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq70 136 3e-27 seq44 136 3e-27 >seq70 Length=538529 Score = 136 bits (150), Expect = 3e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || |||||||||||||| |||||||||||| |||| |||| | || ||||| || Sbjct 173952 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTG 174011 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||||||||| || || | ||||||||||||| || || Sbjct 174012 CTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 174071 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| |||||||| || || Sbjct 174072 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGT 174131 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||| ||||| || || | ||||||| Sbjct 174132 CAGGGTCTTGACGAACACTTGCATG 174156 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 45108 CGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167 ||||||| | ||| | | || | || |||||||||||||||||||| |||||||| Sbjct 83529 CGCCACCGCGCAAACGAAGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCAC 83470 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 ||| | || | || ||||| || ||||| || || |||| || |||||||| || | Sbjct 83469 TCAATGTTCGTCCATCCTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCCGGTG 83410 Query 45228 GCACACCCTCCTTGTCC 45244 | | || ||||||||| Sbjct 83409 GGATTCCTTCCTTGTCC 83393 >seq44 Length=593318 Score = 136 bits (150), Expect = 3e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| ||||||||||||||||||||||||||| |||| || |||| || || || Sbjct 377952 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTG 378011 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||||||||| || || | ||||||||||||| || || Sbjct 378012 CTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 378071 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| || ||||| | || ||||||||||| || Sbjct 378072 GGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGT 378131 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||||||||| || |||||||||||| Sbjct 378132 CAGAGTCTTGACGAAGATTTGCATG 378156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074742576995