Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq31 140 4e-28 >seq31 Length=72577 Score = 140 bits (154), Expect = 4e-28 Identities = 390/592 (66%), Gaps = 16/592 (3%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| ||||| ||||| | ||| | ||||| || |||| || Sbjct 17229 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 17288 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| ||||| ||||| || ||||| || || |||||||| || || || || || Sbjct 17289 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 17348 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC-GGCAC---TGTCATG 36333 || || || || || ||||| || | ||| | ||| | | ||| ||||| |||| Sbjct 17349 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 17407 Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||| | ||||| |||||||| | || || || || ||||| || ||||| Sbjct 17408 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 17467 Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTA----TCAATCAAAAGACTAT 36449 ||||||||| | | | || | || ||||| || |||| || | Sbjct 17468 AAAGAGATA----CTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGT 17523 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 || ||||||| |||||||| || || || ||||| ||||| || || | ||||||| Sbjct 17524 ACGTTTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGG 17583 Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569 ||| || || | | ||| || || | | || ||||| || || || || || Sbjct 17584 CCGCCTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGG 17643 Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTAT 36626 | ||||| ||||||| || || | | ||| | || || | || | | | | Sbjct 17644 CGGCAAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGT 17703 Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 ||| || | | ||||| || | |||| ||||| | ||||| || || ||||| | Sbjct 17704 CCCAGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCG 17763 Query 36687 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 |||| || ||||| | |||||| || || || |||| || |||| ||||| Sbjct 17764 CCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 17815 Score = 129 bits (142), Expect = 8e-25 Identities = 436/672 (65%), Gaps = 8/672 (1%) Strand=Plus/Minus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||||| |||||| || || | | || || || |||||| || || || ||| Sbjct 29669 GGGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATC 29610 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || | || || || | | | ||| || || || ||||| || Sbjct 29609 CACAGCGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGG 29550 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 |||| || | | | ||| | ||||| || |||| ||| ||||| | | || || Sbjct 29549 TCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGG 29490 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || |||||||| | ||| | ||||| || || || || | | ||| || Sbjct 29489 CGCTTGTTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGC 29430 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326 | |||||| || || || || || | || || || | |||||||| || Sbjct 29429 ACAATACCGTTACTCACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTG 29370 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGT 66385 || || || || || || ||| | || ||||| | || || ||| || | ||| Sbjct 29369 TGGATGTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGCGT 29311 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445 ||||| |||||||| || ||| ||| |||| | | || || || ||||| || Sbjct 29310 GTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTG 29251 Query 66446 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 66505 | | || |||||||| || | ||| || || |||||||| || || || || Sbjct 29250 AGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGA 29191 Query 66506 AA-GTAGATTGTACGTCTCAATAGCTGAGTCT--ATATCCCATTGATGAATTCCTACTGC 66562 | |||| |||||||||||||| || | ||| |||||| || || || || || Sbjct 29190 CATGTAG-TTGTACGTCTCAATGGC--ACTCTTGATATCCTCGCCGTGGATACCAACAGC 29134 Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622 |||||||| | |||||||||||| | || | | ||| ||| || || || ||| Sbjct 29133 CACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGGTA 29074 Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682 || || | || || || || ||| ||||||| |||||| || |||||||| | Sbjct 29073 AGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGAC 29014 Query 66683 AACCGAGTTGAG 66694 | |||||| ||| Sbjct 29013 AGCCGAGTCGAG 29002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172018419800