Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq31 264 2e-65 >seq31 Length=72577 Score = 264 bits (292), Expect = 2e-65 Identities = 584/865 (68%), Gaps = 28/865 (3%) Strand=Plus/Minus Query 124998 TTTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTG 125056 |||||| || | || || || || ||| | |||||||| ||||| ||||||| || || Sbjct 17807 TTTCCCTATTCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTG 17748 Query 125057 GACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGA 125116 ||| | |||||| | || ||||| || |||||| |||| ||||| || ||| || Sbjct 17747 GACCGCTGAAGAGATGGACCTGTCGAAAGACCTGCACGACTGGGACCACCGCATGAACGA 17688 Query 125117 AACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGT 125176 | |||||| | ||| | ||| | |||| |||||||||| ||| ||||| ||||| Sbjct 17687 CAATGAGCGCCACTTTGTGAGCCACGTCCTGGCGTTCTTTGCCGCCTCGGATGGCATCGT 17628 Query 125177 CAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGC 125234 ||| || || ||| | || || ||| || || | | |||| ||| Sbjct 17627 CAATGAGAACCTGGTCGAGCGCTTTAGCGCCGAGGTG--CAGGCGGCCGAGGCCCGCTGC 17570 Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294 |||||||| || || || ||||| |||||| | |||||||||| |||||| ||||| Sbjct 17569 TTTTACGGCTTTCAGATTATGATGGAGAACATTCACTCGGAAACGTACTCGCTCCTGATC 17510 Query 125295 GACATGTACATTCGCGATCCGCAACGTAAACACATG---CTCTTTAACGCAATCGACACG 125351 |||| ||||| || || ||| | | | | | | |||||||| || ||||| ||| Sbjct 17509 GACACCTACATCCGTGAGCCGGAGC---AGCGCGAGTATCTCTTTAATGCGATCGAGACG 17453 Query 125352 GTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || ||| | | |||| ||| | |||| | || |||||| ||| | | Sbjct 17452 ATCCCCGTCGTCAAGCAAAA-GGCCGACTGGGCCCTGCGCTGGATCTCGGACAAGCGTGC 17394 Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470 |||| | | || | || ||||| || || ||||| ||||| ||||| || |||||| Sbjct 17393 CTCGTTCTCGGAGCGCCTTGTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTC 17334 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 |||||| | ||||| |||||||||||||| || ||||||||||| ||| || | || Sbjct 17333 GTTTGCGTCGATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAA 17274 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAA 125590 |||| | || || || ||||| || || ||| ||||||||| || || ||| || | Sbjct 17273 CGAGCTCATTTCGCGTGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTTAGCCA 17214 Query 125591 C---TATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647 | | ||| || | | || ||| |||| | ||||| | || || Sbjct 17213 CCTGAAGAAGCGCGCCCA-CCCCGACACAG---TGAACCG--CATCA------TTACGGA 17166 Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCAT 125707 || ||| || || || || ||| | ||||| | || || ||| |||||||||| Sbjct 17165 GGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGCAT 17106 Query 125708 GAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT 125767 |||| | || |||||| ||||||| ||||||||||| || ||||| || | | | Sbjct 17105 GAACGCCCGCCTGATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCT 17046 Query 125768 GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACT 125827 || ||| |||||| | | |||||||||||| || ||| | ||| || || Sbjct 17045 CGGCAACCCTAAGCACTACAACTCGACGAATCCCTTTGACTTTATGGAGAACATTTCGCT 16986 Query 125828 AGAGGGTAAGACCAACTTTTTCGAG 125852 |||| ||| | |||||||||||| Sbjct 16985 GCAGGGCAAGTCGAACTTTTTCGAG 16961 Score = 223 bits (246), Expect = 5e-53 Identities = 391/560 (70%), Gaps = 12/560 (2%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGA--TACGTTACACAGGGCGGCAATA 96888 ||||| ||||| | ||||||| |||| | || ||||| ||||||||||| | Sbjct 29428 GTGCCCATGCTTCGTGTGTACAA--CAATACCGCGCGCTACGTGGATCAGGGCGGCAACA 29485 Query 96889 AACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTA 96948 | || |||||||| | ||| | ||| |||| || |||||| |||| || ||||| |||| Sbjct 29486 AGCGCCCAGGCGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGGATGTGTTTGAATTTA 29545 Query 96949 TCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCAC 97008 |||| ||||||| ||| ||| ||||| | || || | |||||||| || | Sbjct 29546 TCGACCTGCGCAAGAACCACGGCAAGGAAGAAGTGCGCGCACGCGACTTGTTCCTCGCGC 29605 Query 97009 TCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGT 97068 | ||| | || || |||| ||| ||||| | | ||| ||||| || |||| Sbjct 29606 TGTGGATCCCCGACCTGTTTATGCGTCGCGTTGAGCAGAATGGGGACTGGTCGCTGATGT 29665 Query 97069 GCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACA 97128 |||| | | || ||||||||||| || |||| ||||| |||||||| || |||| Sbjct 29666 GCCCTGCCGAGTGCCCCGGTCTGTCTGACTGCTATGGCGAGGAGTTTGAAGCTTTGTACG 29725 Query 97129 CGGCCTACGAGCAAGAGGGCCGATACGTGAGACG---AGTCGATGCACGAGAA-CTGTGG 97184 | ||||||| ||||| || | | | || || ||| | || | |||| ||||| Sbjct 29726 AGCGTTACGAGCGTGAGGGGCG-TGC-TAAG-CGCTCTGTCAAGGCGC-AGAAGTTGTGG 29781 Query 97185 AAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACC 97244 | ||||| || ||| ||| | ||||| || | ||||| ||| || |||||||| | Sbjct 29782 TACGCCATTTTGGAGGCCCAGATTGAGACGGGTAATCCGTTCATCCTGTACAAGGACTCG 29841 Query 97245 GTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACG 97304 | || ||||| |||||||| || ||||||| || ||| ||||||| |||||||| Sbjct 29842 GCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACAATTAAGAGCTCCAACCTGTGCACC 29901 Query 97305 GAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAAT 97364 || || | |||||| ||| ||||| |||||||| || ||| ||||| ||| || | Sbjct 29902 GAGATCATCGAGTACAGCTCGCCGGAAGAGACGGCCGTATGCAACCTGGCCTCGATCGCT 29961 Query 97365 CTGCCCAAGTTTGTAGAGGG 97384 ||||| | |||| | || || Sbjct 29962 CTGCCGACGTTTATTGAAGG 29981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058319992200