Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq70 158 2e-34 seq18 113 7e-21 >seq70 Length=538529 Score = 158 bits (174), Expect = 2e-34 Identities = 193/261 (74%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| || |||| ||||| | || || |||||||| || || |||||||| ||||| Sbjct 107966 GCTAAGCGCCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 108024 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| |||||||| ||||||||| ||||||| | | || || |||| Sbjct 108025 CCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATTTACGACGAGAC 108084 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| ||||| | ||||| ||| |||||||| || | | ||| ||||| Sbjct 108085 TCGTGGTGTCCTGAAGCTGTTCCTTGAGAGCGTTATCCGCGACTCGGTTACCTACACCGA 108144 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || ||||||||||| || | || | |||| || | || || || || Sbjct 108145 ACACGCCAAGCGCAAGACTGTCACTTCGCTCGACGTGATCTACGCGCTCAAGCGCCAGGG 108204 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || ||||| || Sbjct 108205 CCGCACCCTCTACGGTTTCGG 108225 >seq18 Length=258927 Score = 113 bits (124), Expect = 7e-21 Identities = 180/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || || || || || ||||| ||||| ||||| Sbjct 161657 GCGAAGCGCCACCGCAAGAT-TCTGCGCGACAATATTCAGGGCATCACGAAGCCGGCTAT 161715 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| ||||||||||| || || |||||| |||| || || | || || |||| Sbjct 161716 TCGCCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATCTCGGGTCTGATTTACGACGAGAC 161775 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || ||||||||| | || | ||| ||| |||| ||| || || || || || Sbjct 161776 ACGCAGCGTTTTGAAGCTGTTTTTGGAGAGCGTGATCCGTGACTCTGTCACGTACACGGA 161835 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || ||||| || || || | || || | || || | || || ||||| Sbjct 161836 ACACGCCAAGCGCAAGACGGTGACGTCGCTCGACGTCATTTACGCGCTCAAGCGCCAAGG 161895 Query 16672 CCGTAAGATTTATGGT 16687 || | |||||||| Sbjct 161896 GCGCACACTTTATGGT 161911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075113140835