Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq31 143 3e-29 >seq31 Length=72577 Score = 143 bits (158), Expect = 3e-29 Identities = 388/589 (66%), Gaps = 10/589 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||||||||| ||||| | ||| || ||||| || |||| || Sbjct 17229 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 17288 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| ||||| ||||| || ||||| || || || || || || || || || ||| Sbjct 17289 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 17348 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCT-GTCATG 33479 || || || || || ||||| || | ||| | ||| | | ||| | |||| ||| Sbjct 17349 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 17407 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | ||||| |||||||| | || || || ||||| || || ||||| Sbjct 17408 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 17467 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||||||||| | | | || | || || ||||||| || ||| | Sbjct 17468 AAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGT 17527 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 |||||| |||||||| || || |||||||| ||||| || || | ||||||| Sbjct 17528 TTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGC 17587 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| || || | | ||| || || ||| || ||||| || || || || ||| || Sbjct 17588 CTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGC 17647 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCC 33775 ||| ||||||| || || | | ||| | || | || ||| | | | || Sbjct 17648 AAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCAT-TGTCGTTCATGCGGTGGTCCC 17706 Query 33776 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || | | ||||| || | || | ||||| | ||||| || || ||||| |||| Sbjct 17707 AGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCT 17766 Query 33836 TTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | || ||||| | |||||| || | || | || ||||||| ||||| Sbjct 17767 TCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 17815 Score = 134 bits (148), Expect = 2e-26 Identities = 355/535 (66%), Gaps = 8/535 (1%) Strand=Plus/Minus Query 63320 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63379 ||| || ||||| || |||| ||| ||||| | | || || || ||||| || ||||| Sbjct 29532 ATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTGTTGCCGCCCTG 29473 Query 63380 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATAT 63439 ||| | ||| | ||||| || || || || | | ||| || | ||||||||| | Sbjct 29472 ATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTTACTCAC 29413 Query 63440 ACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63499 || || || || | || || || | |||||||| || || || || || Sbjct 29412 GCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGGCCAAT 29353 Query 63500 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATACCCTCTA 63558 || || ||| | || ||||| | || || ||| || | ||||||||| || ||||| | Sbjct 29352 GCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGCGTGTCATAAATGCCCTCAA 29294 Query 63559 TGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 63618 | ||| || |||| | | || || || ||||| || | | || |||| Sbjct 29293 TCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGTACCCG 29234 Query 63619 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTC 63677 |||| || | ||| || || |||||||| || || || || | |||| ||||||||| Sbjct 29233 CATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGACATGTAG-TTGTACGTC 29175 Query 63678 TCAATAGCTGAGTCT--ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735 ||||| || | ||| |||||| || || || || || |||||||| | ||||| Sbjct 29174 TCAATGGC--ACTCTTGATATCCTCGCCGTGGATACCAACAGCCACACGCATGAGCATGT 29117 Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795 ||||||| | || | | ||| ||| || || || ||| || || | || | Sbjct 29116 GCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGGTAAGAGCGCTCAAGCGTCT 29057 Query 63796 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 | || || ||| ||||||| |||||| || |||||||| | | |||||| ||| Sbjct 29056 TGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACAGCCGAGTCGAG 29002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946460250200