Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq31 104 2e-17 >seq31 Length=72577 Score = 104 bits (114), Expect = 2e-17 Identities = 329/501 (66%), Gaps = 23/501 (5%) Strand=Plus/Plus Query 119664 TCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCA 119723 || ||||| || | |||||||| || || ||||| | |||||| || || ||||| | Sbjct 16962 TCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCAAAGGGATTCGTC 17021 Query 119724 GTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCGATG 119783 | |||| | ||||| || ||| | | || | ||| || || ||||||||||| ||| Sbjct 17022 GAGTTGTAGTGCTTAGGGTTGCCGAGGTTGACGAGCAGACGGTCGGCCACAAACTCAATG 17081 Query 119784 TATTCGCACAT--GGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAA 119841 || | |||||| || ||| |||||||| | || | ||| || | ||| | ||| | Sbjct 17082 TACTGGCACATCAGGCGGGCG--TTCATGCCAATCAGCGAGACGGGCAGAGCGTCGGTCA 17139 Query 119842 AGAAATCCTTTTCAATGTCGACCGCTTCTACAAACATACTCAACACCTTGGTCTTGGAGA 119901 | || |||| |||||| | || || || || || | || || ||| || | Sbjct 17140 AAAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGCGGTTCA-CTGTGTCGGGGTGG 17198 Query 119902 GCTTGTTCTTTTCGGGAATATATTTATTGTAGTATAGACAAGCAAAGTCGGTGTGTAGTC 119961 || | | | ||| || | | || || || |||||||||||||| || | Sbjct 17199 GCGCGCT-TCTTCAGG-------TGGCTAAAGAGGAGGCAGGCAAAGTCGGTGTGCAGAC 17250 Query 119962 CTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGCCGGGTA-GAGCTCCTTTTTTC 120020 ||||||| | |||||||| ||||| | | | || |||||| | ||| || | Sbjct 17251 CTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCC------C 17304 Query 120021 GAGTCTTTGATATAGTAGATTGCAGCAAAACTACCAGaaaaaaaGACGCCTTCGACGATA 120080 | || |||| || |||| | ||||| ||| || ||||||| || || ||| Sbjct 17305 GCTTC-TTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAGATACCCTCCACGGCT 17363 Query 120081 GCAAAAGCGACCATGCGTTCGGCGAATGTGGCA-GATTGATTTTCGATCCATTTTTGAGC 120139 |||||||| || | ||| || | ||| | |||| | ||| | |||||| | || Sbjct 17364 GCAAAAGCCACAAGGCGCTCCGAGAACGAGGCACGCTTG-TCCGAGATCCAGCGCAGGGC 17422 Query 120140 CCAAGCCGCCTTCTGCTTGAC 120160 ||| | ||||| |||||||| Sbjct 17423 CCAGTCGGCCTTTTGCTTGAC 17443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661831588400