Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq31 329 8e-85 >seq31 Length=72577 Score = 329 bits (364), Expect = 8e-85 Identities = 645/942 (68%), Gaps = 26/942 (3%) Strand=Plus/Plus Query 363389 TTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTG 363448 ||||||||| |||||| | ||| || ||||| || ||||| ||| | ||| | Sbjct 29045 TTTTCGGATTCAAGACGCTTGAGCGCTCTTACCTGCTGCGGATCAACGGTAAGGTTGCCG 29104 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 | ||||| ||||| ||| | |||||||| ||| |||||||||| || |||| | | Sbjct 29105 AGCGCCCTCAGCACATGCTCATGCGTGTGGCTGTTGGTATCCACGGCGAGGATATCAAGA 29164 Query 363509 CCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA----TTCACGCACGCCACGCCA 363564 || ||||| || || || ||| || || | | ||||||||||| ||||| Sbjct 29165 GTGCCATTGAGACGTACAA----CTACATGTCCGAGAAGGCTTTCACGCACGCGTCGCCA 29220 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 || ||| |||||| || || | | || |||||||| || ||||| ||| | | ||| Sbjct 29221 ACCCTGTTCAATGCGGGTACGCCCCACCCTCAGATGTCGTCGTGCTTCCTTGTCAGTATG 29280 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||||||||| || ||||| || | |||||| || |||| ||||| | || |||||| Sbjct 29281 AAGGACGATTCGATTGAGGGCATTTATGACACGCTCAAGACGTGTGCCATGATCTCCAAG 29340 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC 363744 | || || || ||||| | |||||||| ||||||| | | |||||| Sbjct 29341 ACGGCCGGTGGCATTGGCCTGAACATCCACAACATTCGTGCGACGGGCTCGTACATTGCT 29400 Query 363745 GGCAC--AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 ||||| | || | | | || || | || |||||||||||||||| ||||||| | Sbjct 29401 GGCACAAACGGCGTGAGT--AACGGTATTGTGCCCATGCTTCGTGTGTACAACAATACCG 29458 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 || | ||||| || ||||| || |||||| ||| || ||||| || || || |||| Sbjct 29459 CGCGCTACGTGGATCAGGGCGGCAACAAGCGCCCAGGCGCCTTTGCCATTTACCTGGAGC 29518 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | || | ||| | ||||| ||| | || || || || ||| || || || ||| Sbjct 29519 CCTGGCACTCGGATGTGTTTGAATTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAAG 29578 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 |||| ||||| || ||||| || || ||| | | |||| |||||| ||||| | Sbjct 29579 TGCGCGCACGCGACTTGTTCCTCGCGCTGTGGATCCCCGACCTGTTTATGCGTCGCGTTG 29638 Query 363983 AGGCAG-GTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG- 364039 | |||| | | | ||||| || | ||||| ||| || || ||||| || || || Sbjct 29639 A-GCAGAATGGGGACTGGTCGCTGATGTGCCCTGCCGAGTGCCCCGGTCTGTCTGACTGC 29697 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT---C 364096 ||| || || || | || ||| | ||||| || || ||||| ||| | Sbjct 29698 TAT--GGCGAGGAGTTTGAAGCTTTGTACGAGCGTTACGAGCGTGAGGGGCGTGCTAAGC 29755 Query 364097 G-TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 | | | ||| || |||||| | |||| ||||| |||| | ||||||||||| Sbjct 29756 GCTCTGTCAA----GGCGCAGAAGTTGTGGTACGCCATTTTGGAGGCCCAGATTGAGACG 29811 Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215 || | || | || ||||||| || ||| |||||||||| ||||||| || |||| Sbjct 29812 GGTAATCCGTTCATCCTGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTG 29871 Query 364216 GGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 || |||||| || |||||| || |||||||| || || |||| | | || || ||| Sbjct 29872 GGCACAATTAAGAGCTCCAACCTGTGCACCGAGATCATCGAGTACAGCTCGCCGGAAGAG 29931 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 || |||||||| ||||| || |||||||| || ||| ||||| Sbjct 29932 ACGGCCGTATGCAACCTGGCCTCGATCGCTCTGCCGACGTTT 29973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352013574290