Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq31 140 4e-28 >seq31 Length=72577 Score = 140 bits (154), Expect = 4e-28 Identities = 390/593 (66%), Gaps = 18/593 (3%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| ||||| ||||| | ||| | ||||| || |||| || Sbjct 17229 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 17288 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||| ||||| || ||||| || || |||||||| || || || || || Sbjct 17289 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 17348 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCT-GTCATG 32836 || || || || || ||||| || | ||| | ||| | | ||| | |||| ||| Sbjct 17349 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 17407 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | ||||| |||||||| | || || || || ||||| || ||||| Sbjct 17408 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 17467 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTA----TCAATCAAAAGACTAT 32952 ||||||||| | | | || | || ||||| || |||| || | Sbjct 17468 AAAGAGATA----CTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGT 17523 Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012 || ||||||| |||||||| || || || ||||| ||||| ||||| | ||||||| Sbjct 17524 ACGTTTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGG 17583 Query 33013 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 33072 ||| || || | | ||| || || | | || ||||| || || || || || Sbjct 17584 CCGCCTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGG 17643 Query 33073 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTA 33128 | ||||| ||||||| || || | | ||| | || | || ||| | | Sbjct 17644 CGGCAAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCAT-TGTCGTTCATGCGGTGG 17702 Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188 | ||| || | | ||||| || | |||| ||||| | ||||| || || ||||| Sbjct 17703 TCCCAGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCC 17762 Query 33189 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 ||||| || ||||| | |||||| || || || |||| || |||| ||||| Sbjct 17763 GCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 17815 Score = 129 bits (142), Expect = 7e-25 Identities = 617/965 (64%), Gaps = 22/965 (2%) Strand=Plus/Minus Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 ||| || || || || | || ||||||| |||||| || || | | || || || Sbjct 29688 CAGACCGGGGCACTCGGCAGGGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACG 29629 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 |||||| || || || ||||| || || | || | || | | | ||| || || Sbjct 29628 CATAAACAGGTCGGGGATCCACAGCGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTT 29569 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || ||||| || |||| || | | | ||| || ||||| || |||| ||| Sbjct 29568 GCCGTGGTTCTTGCGCAGGTCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTA 29509 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 ||||| | | || || || ||||| || |||||||| | ||| | ||||| || || Sbjct 29508 AATGGCAAAGGCGCCTGGGCGCTTGTTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTT 29449 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 || || | | ||| || | |||||| || || || || || | || || Sbjct 29448 GTACACACGAAGCATGGGCACAATACCGTTACTCACGCCGTTTGTGCCAGCAATGTACGA 29389 Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378 || | |||||||| || || || || || || || ||| | || ||||| | Sbjct 29388 GCCCGTCGCACGAATGTTGTGGATGTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCAT 29329 Query 63379 TGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || ||| || | ||| ||||| |||||||| || ||| ||| |||| | | | Sbjct 29328 GGCACA-CGTCTTGAGCGTGTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAA 29270 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || ||||| || | | || |||||||| || | ||| || || |||| Sbjct 29269 GGAAGCACGACGACATCTGAGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGT 29210 Query 63498 GAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCT--ATATCCC 63554 | || || || || || | |||| |||||||||||||| || | ||| |||||| Sbjct 29209 GCGTGAAAGCCTTCTCGGACATGTAG-TTGTACGTCTCAATGGC--ACTCTTGATATCCT 29153 Query 63555 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63614 || || || || || |||||||| | |||||||||||| | || | | ||| Sbjct 29152 CGCCGTGGATACCAACAGCCACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTAC 29093 Query 63615 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 63674 ||| || || || ||| || || | || || || || ||| ||||||| || Sbjct 29092 CGTTGATCCGCAGCAGGTAAGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTAGTGAA 29033 Query 63675 AGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCA 63734 |||| || |||||||| | | |||||| ||| | || | || || | || || Sbjct 29032 AGTCGCGCTCGTAAATGACAGCCGAGTCGAGCGTGTC---ACGGTTCTTCATCACCGCC- 28977 Query 63735 TGGTA---ATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTG 63790 | ||| | ||| || || || || ||| || || | || || || ||||||| | Sbjct 28976 TCGTACGTCTCCTTAGAGATCATGGGGCTATGCTTGCCCGTCTTTGGGTTCACATAGTCG 28917 Query 63791 AATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGATA 63848 | || |||| | ||| | ||||| | || || || || ||||| || || ||||| Sbjct 28916 TACAAGTCCTGGACCACATGGCTAAAGTGCTTCTTGGTCTCCTTGTGAAGGTTGCTGATA 28857 Query 63849 CGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCT 63907 || || | || || || | ||||| || || || |||| | | || || || Sbjct 28856 --GCGATACGCGCCGCCAGCACCGCATAGTCAGGGTG-TGTGGTGGTCTTGTACGCGGCC 28800 Query 63908 ATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATA 63967 | ||||| || || |||| | || ||||| || || || | || || || | ||| Sbjct 28799 GTCTCGGCAGCGAGGTTGTCGAGCTCGACCGTGGTCACGCCCTCGTAGATGCCATCGATC 28740 Query 63968 ACCTT 63972 ||||| Sbjct 28739 ACCTT 28735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631247562000