Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq70 116 3e-21 seq44 84.2 2e-11 >seq70 Length=538529 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||| | || || ||||| ||||||| || | ||||| | || |||||||| || Sbjct 174155 ATGCAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 174096 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| ||||| || ||| ||||| || || || || || |||||| Sbjct 174095 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 174036 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||||||| || |||| ||||| Sbjct 174035 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 173976 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || || | ||||| Sbjct 173975 ATCCAGAAGGAGAGCACTCTTCACCTTGTGCT 173944 >seq44 Length=593318 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| |||| || || | ||||| | || || || || || Sbjct 378155 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTCA 378096 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || || || |||| Sbjct 378095 GACACGATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACC 378038 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || ||||| || || | || || | || || || |||| |||| Sbjct 378037 AACAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACA 377978 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | ||||| || || ||| || || | ||||| Sbjct 377977 ACATTCAGAAGGAGAGCACCCTGCACCTCGTGCT 377944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327498287425