Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq70 91.5 1e-13 >seq70 Length=538529 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/137 (76%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || ||||| |||||||||||||| |||||||| || Sbjct 173928 ACCACCACGCAGACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 173987 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || | || || | || |||| |||||||||||||| ||||||||||| || ||| | Sbjct 173988 CAGAGTG-CGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGG 174046 Query 34019 GCACGCTCTCTTTGTCC 34035 | | | ||| |||||| Sbjct 174047 GGATACCCTCCTTGTCC 174063 Score = 86.0 bits (94), Expect = 5e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCG 33972 || ||||| ||||| |||||||||||||||||||| ||||| || |||| ||| | Sbjct 83515 CGAAGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCACTCAATGTTCGTCCA 83456 Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || |||| ||||| || ||||| |||||||| || || ||| Sbjct 83455 TCCTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCC 83414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061940276190