Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq31 167 2e-36 seq70 95.1 1e-14 seq44 91.5 1e-13 >seq31 Length=72577 Score = 167 bits (184), Expect = 2e-36 Identities = 302/440 (69%), Gaps = 19/440 (4%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 ||||| || ||| ||||| |||| |||||||| |||||| |||| || | | Sbjct 17371 GCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTTGCGTCGATCTTCTGGCTC 17312 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||||||||| |||| |||||||| || ||| | |||||| Sbjct 17311 AAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGACGAA 17252 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTGGAC 47327 || ||||||||| |||||||||| ||| || ||| | | | ||| | | Sbjct 17251 GGTCTGCACACCGACTTTGCCTGCCTCCTCTT------TAG---CCACCTGAAGAAG--C 17203 Query 47328 GTGCCCACCGT----CAGCGA----CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGT 47379 | ||||||| ||| || ||| || | || || || ||||||||| ||| | Sbjct 17202 GCGCCCACCCCGACACAGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCAGGACT 17143 Query 47380 TTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGT 47439 |||| |||| |||||||||| || | | || |||||||| ||||| | ||| Sbjct 17142 TTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTGCCAGT 17083 Query 47440 ACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACA 47499 |||| || ||||| |||||||| |||||||| | || | || ||| ||| || Sbjct 17082 ACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAACT 17023 Query 47500 CCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCG 47559 | |||||| || || |||||| | ||||||||||| |||||||| | |||||||||| Sbjct 17022 CGACGAATCCCTTTGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCG 16963 Query 47560 AGAAGCGCGTCGGCGAATAT 47579 || ||||||| ||| ||| Sbjct 16962 AGCGCCGCGTCGCCGACTAT 16943 >seq70 Length=538529 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || |||||| ||| || ||||| || || || | Sbjct 173964 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAA 174023 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || || || || |||||||||||| ||| || ||| | | Sbjct 174024 GATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 174083 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||| | | ||| || || | ||| | ||| || |||||||| || || || Sbjct 174084 CTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGAC 174143 Query 127102 AAAAATCTGCATGGC 127116 || | |||||||| Sbjct 174144 GAACACTTGCATGGC 174158 >seq44 Length=593318 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || || || || || ||||| || || ||| | Sbjct 377964 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAA 378023 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || || || || |||||||||||| ||| || ||||| | Sbjct 378024 GATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 378083 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||| | || || || | || | ||| ||||| |||||||| || || Sbjct 378084 GTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 378143 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 378144 GAAGATTTGCATGGC 378158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500235342800