Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq31 410 1e-109 seq70 111 2e-19 seq44 107 2e-18 >seq31 Length=72577 Score = 410 bits (454), Expect = 1e-109 Identities = 592/827 (72%), Gaps = 25/827 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| || |||||| | |||||| || ||||| || | Sbjct 16961 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCATAAAGTCAAAGGGATTCGT 17020 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | |||||||||||| | |||||| ||| ||||||||| | ||||||||| ||||| Sbjct 17021 CGAGTTGTAGTGCTTAGGGTTGCCGA---GGTTGACGAGCAGACGGTCGGCCACAAACTC 17077 Query 132744 GATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGT 132803 ||||| || |||| | || | || | ||| || ||||| || ||||| Sbjct 17078 AATGTACTGGCACATCAGGCGGGCGTTCATGCCAATCAGCGAGACGGGCAGAGCGTCGGT 17137 Query 132804 GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT----TTCCCTAACGCGCGCCG 132859 | |||| ||||| ||||| || || || || | ||| ||| || | | || Sbjct 17138 CAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGCGGTTCACT-----GTGTCG 17192 Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 | | ||| || | | || || | || | | ||| ||||||||| |||| || Sbjct 17193 GGGTGGGCGCGCTTCTTCAGGTGGCTAAAGAGGAGGCAGGCAAAGTCGGTGTGCAGACCT 17252 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||| | |||||||| ||||| ||| | || ||||||||||||||| || || ||| Sbjct 17253 TCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATGAGGCCCCGCTTCTTG 17312 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || || | || || ||||| || |||| ||||| ||||| || |||||| Sbjct 17313 AGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAGATACCCTCCACGGCTGCAAAAGCC 17372 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 || |||||||| ||||| ||| ||| | |||||||||||| ||||| |||||| Sbjct 17373 ACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGAGATCCAGCGCAGGGCCCAGTCGGCC 17432 Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCT--TCCG 133156 |||| |||||| || ||||| ||||| || || || | | | | | || |||| Sbjct 17433 TTTTGCTTGACGACGGGGATCGTCTCGATCGCATTAAAGAGAT--ACTCGCGCTGCTCCG 17490 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 ||| | |||||||||||| ||| ||| ||| |||||||||| | ||||||||| Sbjct 17491 GCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGTTTCCGAGTGAATGTTCTCCATCA 17550 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGC 133275 || ||||||||||||||||| || |||||| || ||||||| || | || ||| ||| Sbjct 17551 TAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGCCTGCACCTC-GGCGCTAAAGCGC 17609 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 |||||||| || || ||||||||||| || |||||| || || ||||| ||||| | Sbjct 17610 TCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGCAAAGAACGCCAGGACGTGGCTC 17669 Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 | || |||||||| |||||||||| || | ||||||||| || ||| || |||||| Sbjct 17670 ACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAGGTCTTTCGACAGG 17729 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| ||| || ||||||| ||||| ||||| || || |||||||| Sbjct 17730 TCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCTTCTTGTACAT 17776 >seq70 Length=538529 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || || || || || |||||| | || || ||| | || Sbjct 174155 ATGCAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 174096 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || ||| | |||||| Sbjct 174095 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 174036 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| |||||||| || | ||||| || | |||||||||| Sbjct 174035 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 173976 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||| ||| || | || || Sbjct 173975 ATCCAGAAGGAGAGC-ACTCTTCACCTTGTGCTTCGTCTGCGTGGTGG 173929 >seq44 Length=593318 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| | || || || || | Sbjct 378155 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTCA 378096 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || ||| | |||||| Sbjct 378095 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 378036 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || |||| || ||||| | |||||||||| Sbjct 378035 CAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACAAC 377976 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| ||| || ||||| | ||||| || Sbjct 377975 ATTCAGAAGGAGAGC-ACCCTGCACCTCGTGCTTCG 377941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172206044800