Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq31 250 3e-61 >seq31 Length=72577 Score = 250 bits (276), Expect = 3e-61 Identities = 1052/1633 (64%), Gaps = 55/1633 (3%) Strand=Plus/Minus Query 109531 CCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTAC 109590 || || || || |||||||||||||| |||||||||||| ||||| || ||| ||||| Sbjct 30716 CCGCGGTCCGCAGCCATGTCGATGATGACCTTTTGGCTAATCTCCCACACGGTCCTGTAC 30657 Query 109591 AAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACC 109650 | |||||| || |||||| | | ||||| || || ||||| || | | || Sbjct 30656 AGCGCCTTGATGCGGTCAGGAATGCCAGCAATGTTCTGGATCGAGCCGCC-GTGTGCAAT 30598 Query 109651 A-TGAGATCCTTCATC---TCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAG 109706 | | | |||||| || ||| ||||| |||| || ||| ||| | || Sbjct 30597 AATCTTTTGCTTCATAGAGTCGTTC---CAGAGGCCGAGCTCGACGAGTTCGCGCAGGAG 30541 Query 109707 ATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGT 109766 | ||||||||| || || ||||| || ||| || | ||| ||||| |||| Sbjct 30540 CCACGGGTTGACCACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGCTCGT 30481 Query 109767 GTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGG 109826 |||||| || || ||||| || ||| ||||| || || || ||||| ||||| || Sbjct 30480 GTAGGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCATCGG 30421 Query 109827 AGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTC--- 109883 |||||||| || ||| || ||||| | | | | | || || ||| | Sbjct 30420 TGCCATGAGCAGCGAGTTGCGAAGACCGTGC---TGTGCAATCTGG-GCCTTGAGCGAGG 30365 Query 109884 -CCAATCATA-ACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACA 109941 |||||| | | | || | || | | | |||||| || ||| | | Sbjct 30364 TCCAATCCCATAGGTCCG------TCGGTGTG-CGGTTCCACATGTCATATTGCAAAAGG 30312 Query 109942 CCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCG 110001 |||| | |||||| |||| | | ||||||| | || | | | |||| |||| Sbjct 30311 CCCTGCGAGGCAGGACTGCCCTCGTAGGTCTCGTAGGGGCCGTACTCGGCCGCCAGCTCG 30252 Query 110002 GATGAAGC-CTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCG 110060 | | || ||| || || ||||| || || |||||||| || || | |||| ||| || Sbjct 30251 CA-GCTGCGCTCAAGGGCTGCATGGTAGATTGTCTCAAATATTTGCACGTTCAGGAGACG 30193 Query 110061 AGACTCTTCACAGTCGAAGGGA-AGACCACAAAGAATAAACACATCCGCTAGACCCTGAA 110119 || ||| | | ||| || ||| || ||| | | |||| | ||||| || ||||||| Sbjct 30192 AGCCTCCTGGCTGTCAAACGGATAGCCCATGATCA-TAAAAGCGTCCGCCAGGCCCTGAA 30134 Query 110120 CACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAA 110179 |||||| ||| |||||||| || ||| || ||||| || || | || |||||||| Sbjct 30133 CACCGATACCGATGGGGCGGTGGCGCATATTCGAGCGACGTGCGCTCTCCACGGGGTAGT 30074 Query 110180 AGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTT 110239 |||| |||||||| || || || ||||| ||| ||||| | || || || Sbjct 30073 AGTTAATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACATCGTGCAGGC 30014 Query 110240 TGTCGTAATCGAACGTTTTCGTCTCCTTATTGACAT------ATTTGGGGAGAGCAATAG 110293 | | | | | |||| || | | | | || | | | | || ||||| || | Sbjct 30013 GCTGGAAGTTGTACGTCTTGGACGCGCCAGTGCCTTCAATAAACGTCGGCAGAGCGATCG 29954 Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353 | || || ||||| || | ||||| || | |||| || | || || || |||| Sbjct 29953 AGGCCAGGTTGCATACGGCCGTCTCTTCCGGCGAGCTGTACTCGATGATCTCGGTGCACA 29894 Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413 |||||| |||||||| |||| ||||||||| || ||| |||| | |||| Sbjct 29893 GGTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGAGTCCT 29834 Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472 | || || ||| | || |||| || || |||| | || | |||||| | ||| | | Sbjct 29833 TGTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCTCCAAAATGGCGTACCACAACT 29774 Query 110473 TCGGCGGCGGGGACAGTTGCG-TTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTC 110531 || ||| | | |||| ||| ||||| | || || |||||| |||||| | Sbjct 29773 TCTGCGCCTTG-ACAGA-GCGCTTAGCACGCCCCTCACGCTCGTAACGCTCGTACAAAGC 29716 Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 ||||| |||| || || ||||| ||||| || | | || || | || || Sbjct 29715 TTCAAACTCCTCGCCATAGCAGTCAGACAGACCGGGGCACTCGGCAGGGCACATCAGCGA 29656 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||| | ||| || |||||| | ||| |||||||| || ||||||| ||| ||| Sbjct 29655 CCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATCCACAGCGCGAGGAA 29596 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 | ||| || || | ||||| | || ||||| ||| || || | ||| || | Sbjct 29595 CAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGATAAATTCAAA 29536 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACC 110765 | |||||||||||| || || || || | || | || || ||| | | | Sbjct 29535 CACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTT--GTTGCCG 29478 Query 110766 CGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATC 110825 | |||| | || ||||| || || ||| | || | ||||| || | ||| || | Sbjct 29477 C-CCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTT 29419 Query 110826 GGATTGAC--CATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGC 110883 | | || | ||||| || ||| || | |||||||||| |||||| | | Sbjct 29418 --ACTCACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTC 29361 Query 110884 ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAAT 110942 | ||||| ||||| ||| ||| || |||||| ||| |||| || ||||||| Sbjct 29360 AGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCT-TGAGCGTGTCATAAAT 29302 Query 110943 ACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGG 111002 || ||||||||||| |||| | | || ||||| || ||||||||||| | || Sbjct 29301 GCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGG 29242 Query 111003 CGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGT 111061 ||| ||||||||||| || || || | ||| || |||| || | | | |||||| | || Sbjct 29241 CGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAA-AGCCTTCTCGGACATGTAGT 29183 Query 111062 TGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 |||| || || | || | ||| | ||||| ||||||| || || ||||||| Sbjct 29182 TGTACGTCTCAATGGCACTCTTGATATCCTCGCCGTGGATACCAACAGCCACACGCATGA 29123 Query 111122 ACATATATTGAGG 111134 ||| | ||||| Sbjct 29122 GCATGTGCTGAGG 29110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975300591000