Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq31 228 2e-54 >seq31 Length=72577 Score = 228 bits (252), Expect = 2e-54 Identities = 564/858 (66%), Gaps = 24/858 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | ||| ||||||||| |||||||| || Sbjct 17788 GAGATCTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACCGCTGAAGAGATGGAC 17729 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTC 25590 ||| | || ||| || ||| |||| || | || ||| |||| || ||| | Sbjct 17728 CTGTCGAAAGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTG 17669 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| |||| |||||||| ||||| ||||| || || || ||||| ||| |||| Sbjct 17668 AGCCACGTCCTGGCGTTCTTTGCCGCCTCGGATGGCATCGTCAATGAGAACCTGGTCGAG 17609 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | || | | || |||||| | |||||| || || ||||| || ||||| Sbjct 17608 CGCTTTAGCGCCGAGGTGCAGGCGGCCGAGGCCCGCTGCTTTTACGGCTTTCAGATTATG 17549 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA- 25766 || || || | ||||| || ||| | ||| ||||| || ||||| || Sbjct 17548 ATGGAGAACATTCACTCGGAAACGTACTC---GCTCCTGATCGACACCTACATCCGTGAG 17492 Query 25767 -CGTCGCCGAGAGAG-ATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGG 25824 || || | | ||| ||| | ||| ||| |||||| || ||| | ||||| Sbjct 17491 CCGGAGCAGCGCGAGTATC---TCTTTAATGCGATCGAGACGATCCCCGTCGTCAAGCAA 17435 Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTG 25884 ||||| |||||| || |||||| | || | || |||| ||||| || Sbjct 17434 AAGGCCGACTGGGCCCTGCGCTGGATCTCGGACAAGCGTGCCTCGTTCTCGGAGCGCCTT 17375 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || || ||||| || |||||||| ||||||||| |||||||||||| | ||||||||| Sbjct 17374 GTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTTGCGTCGATCTTCTGG 17315 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || ||| ||||||||| |||| || || ||||||||||| | ||| Sbjct 17314 CTCAAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGAC 17255 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 || ||||| |||| || ||||||||||| |||| | ||||| || | || | Sbjct 17254 GAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTTA---GCCAC---CTGAAGAAGCGC 17201 Query 26065 TCTCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTT 26121 | || || || || || | ||||| | |||||||||| || ||| |||| ||| Sbjct 17200 GCCCACCCCGACACAGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCAGGACTTT 17141 Query 26122 CNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATAC 26181 | ||||||||| | | || ||| |||| ||| Sbjct 17140 TTGACCGACGCTCTGCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTGCCAGTAC 17081 Query 26182 ATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACG 26241 ||||||| ||||||||||| |||||| | | || || | | | | ||||| || Sbjct 17080 ATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAACTCG 17021 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 | || || || ||||||||||| ||||| ||| || | || ||| | ||||| || || Sbjct 17020 ACGAATCCCTTTGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGAG 16961 Query 26302 AAGAGGGTCGGCGACTAT 26319 | |||| ||||||| Sbjct 16960 CGCCGCGTCGCCGACTAT 16943 Score = 190 bits (210), Expect = 4e-43 Identities = 855/1323 (65%), Gaps = 39/1323 (3%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCG-T 221418 ||||| || ||||| | ||||||||| |||||| | ||| | |||| ||||| | Sbjct 30299 GGACTGCCCTCGTAGGTCTCGTAGGGGCCGTACTCGGCCGCCAGCTCGCAG--CTGCGCT 30242 Query 221419 CA-GGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAG 221477 || |||| || |||||||| |||||||| || | ||| || ||||| | | Sbjct 30241 CAAGGGCTGCATGGTAGATTGTCTCAAATATTTGCACGTTCAGGAGACGAGCCTCCTG-G 30183 Query 221478 AAGTGAAGGGCATA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || || | ||| | || ||| ||| |||| ||||| ||||| || ||||||||| Sbjct 30182 CTGTCAAACGGATAGCCCATGATCATAAAAGCGTCCGCCAGGCCCTGAACACCGATACCG 30123 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGC---CGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | | || || ||| | |||| || |||||| || |||| | | Sbjct 30122 ATGGGGCGGTGGCGCATATTCGA-GCGACGTGCGCT-CTC-CACGGGGTAGTAGTTAATG 30066 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||| |||||| | || || ||| ||| ||| |||| Sbjct 30065 TCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACATCGTGCAGGCGCTGGAAG 30006 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713 ||| || | | | ||| ||| ||| | ||| | || || | | Sbjct 30005 TTGTACGTCT--TGGACGCGCCAGTGCC----TTCAATAAACGTCGGCAGAGCGATCGAG 29952 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 |||||||| || |||||| ||| ||| | | |||| |||||||| || || ||| Sbjct 29951 GCCAGGTTGCATACGGCCGTCTCTTCCGGCGAGCTGTACTCGATGATCTCGGTGCACAGG 29892 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| || ||| || || ||||||| || || || |||||| ||||| | ||||||| Sbjct 29891 TTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGAGTCCTTG 29832 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || || || || ||| || ||||| | ||| ||| ||| ||| || ||| | | | Sbjct 29831 TACAGGATGAACGGATTACCCGTCTCAATCTGGGCCTCCAAAATGGCGTACCACAACT-T 29773 Query 221894 CTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 ||| || | || | | ||| | ||||| || | | | || || | ||| | Sbjct 29772 CTGCGCCTTGACAGAGCGCTTAGCACGCCCCTCACGCTCGTAACGCTCG-TACAAAGCTT 29714 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 |||||| || || || || ||| || || ||| ||| || |||||||| Sbjct 29713 --CAAACTCCTCGCCATAGCAGTCAGACAGACCGGGGCACTCGGCAGGGCACATCAGCGA 29656 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||||| | || | | || | |||| || ||||| |||||||||||||| | || Sbjct 29655 CCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATCCACAGCGCGAGGAA 29596 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 | || | | ||| || ||| ||||| ||| || | ||| || | ||| ||||| Sbjct 29595 CAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGATAAATTCAAA 29536 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 | || | |||||| |||||||| || | ||| | ||||| || ||||||||||| || Sbjct 29535 CACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTGTTGCCGCC 29476 Query 222193 CTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 ||||||||| | | | | |||| | | ||||| | || || | ||||| Sbjct 29475 CTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTTACT 29416 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGC 222311 ||||| ||||| |||||||| || || | | ||| ||| | || || Sbjct 29415 CACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTT-GTGGATGTTCAGGC 29357 Query 222312 CGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCT 222371 | || |||||||| || ||||||||||| || ||||||| ||||| ||||||| Sbjct 29356 CAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCATAAATGCCCT 29297 Query 222372 CCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAAC 222431 | || || || ||||| | | | || || || ||||||||||||| | || | || Sbjct 29296 CAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGTAC 29237 Query 222432 AGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCC--CCTAGACATCAGATCGTA 222489 || || ||||| || || ||||| || || |||| | ||||| | ||| Sbjct 29236 CCGCATTGAACAGGGTTGGCGACGCGTGCGTGAA--AGCCTTCTCGGACATGTAGTTGTA 29179 Query 222490 CGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT--CTGCATGGCGCATCTCATGTAC 222547 |||||| | | | || ||| | || ||||| || | || | | || | |||| | Sbjct 29178 CGTCTCAATGGCACTCTTGATATCCTCGCCGTGGATACCAACA-GCCACA-CGCATGAGC 29121 Query 222548 ATGTACTG-GGGC-CTC-TCCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCC 222604 |||| ||| |||| ||| | || ||| || || | | |||||||| || || Sbjct 29120 ATGTGCTGAGGGCGCTCGGCAACCTTACCGTT-GATCCG--CAGCAGGTAAGAGCGCTCA 29064 Query 222605 AGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCC 222664 || |||||||| || || ||||| || |||||| | ||| || || || | ||| Sbjct 29063 AGCGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACAGCCGAGTCG 29004 Query 222665 AGC 222667 ||| Sbjct 29003 AGC 29001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843696996800