Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq70 91.5 1e-13 seq31 87.8 2e-12 >seq70 Length=538529 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 24775 AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGAT 24834 ||| || ||| |||||||| ||||| |||||||| || || || |||||||| |||| Sbjct 83372 AACAGTGAAAACCAAGATCCAGGACAAGGAAGGAATCCCACCGGACCAACAACGCCTGAT 83431 Query 24835 CTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAACATTCAAAAGG 24893 ||||| || || ||||||||||| | || |||| || || || || ||||| |||| Sbjct 83432 TTTTGCGGGAAAGCAGCTGGAGGA-TGGACGAACATTGAGTGACTACAATATTCAGAAGG 83490 Query 24894 AATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAA 24935 | || || || | ||| | || |||||||| |||| || Sbjct 83491 AGAGCACGCTCCATCTCGTGCTTCGTTTGCGCGGTGGCGCAA 83532 >seq31 Length=72577 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 126321 GATGTGCGAATATATAGAGTTCGTAGCGGACCGTTTGCTCGTCGAATTACGACAACCGAA 126380 ||||||| | || || ||||| || || |||||| |||||||| | | || ||||| | Sbjct 17093 GATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCT-CGGCAACCCTA 17035 Query 126381 A-CACTTTAATACACCCAATCCATTTAACTTTATGAACAATATTTCTCTCGAGGGAAAGA 126439 | |||| || | | ||||| ||| |||||||| | || ||||| || |||| ||| Sbjct 17034 AGCACTACAACTCGACGAATCCCTTTGACTTTATGGAGAACATTTCGCTGCAGGGCAAGT 16975 Query 126440 CTAACTTTTTCGAGAGACGTGTCGGAGAGTAT 126471 | |||||||||||| | || |||| || ||| Sbjct 16974 CGAACTTTTTCGAGCGCCGCGTCGCCGACTAT 16943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897065746600