Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq31 158 1e-33 seq44 91.5 1e-13 >seq31 Length=72577 Score = 158 bits (174), Expect = 1e-33 Identities = 342/504 (68%), Gaps = 17/504 (3%) Strand=Plus/Minus Query 46774 AAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCA 46833 |||||||| | |||||| || |||||| | | || ||| || | | |||||| Sbjct 17436 AAAAGGCCGACTGGGCCCTGCGCTGGATCTCGGACAAGCGTGCCTCGTTCTCGGAGCGCC 17377 Query 46834 TGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTT 46893 | ||||| || || || || || | ||||| ||||| ||||| | || || | Sbjct 17376 TTGTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTTGCGTCGATCTTCT 17317 Query 46894 ACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCG 46953 | || | ||| | ||||| |||||| ||||| |||||| | || ||||| | Sbjct 17316 GGCTCAAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTG 17257 Query 46954 ACGAAGGACTACACACGGACTTTGCGTGTCTC-TATTACAAGACGCGCGTGAATGAGAAA 47012 ||||||| || ||||| |||||||| || ||| | || | | | |||| || Sbjct 17256 ACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTT----AGCCACCTGAAGAAGCGC 17201 Query 47013 TTAAACTCGGACAC---GATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAG 47069 || | ||||| || || |||| ||| |||||| ||| ||| || |||| Sbjct 17200 GCCCACCCCGACACAGTGAACC---GCATCATTACGGAGGCTGTGGCCATTGAGCAGGAC 17144 Query 47070 TTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGA 47128 ||||| || | || ||||||||| | || | ||||||||||| | | || |||||| | Sbjct 17143 TTTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGCATGAACGCCC-GCCTGATGTGCCA 17085 Query 47129 ATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAA 47188 || |||||||||||||| || |||||| | || | ||||| | || || | | || Sbjct 17084 GTACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAA 17025 Query 47189 TGCTCG--TAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTT 47246 |||| ||||| ||||| |||||| | ||||||||||| ||||||| | || ||| Sbjct 17024 --CTCGACGAATCCCTTTGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTTT 16967 Query 47247 TTCGAGAAACGAGTCGGAGAGTAT 47270 |||||| || |||| || ||| Sbjct 16966 TTCGAGCGCCGCGTCGCCGACTAT 16943 Score = 158 bits (174), Expect = 1e-33 Identities = 1114/1763 (63%), Gaps = 79/1763 (4%) Strand=Plus/Minus Query 146704 AAAGCGTTGCGGTCGGCCGCCATCTCAATCATG-CGTTTTGTCTTCATTTCCCAAGCGGT 146762 |||||| |||||| || ||||| || || ||| | ||||| || || ||||| |||| Sbjct 30722 AAAGCGCCGCGGTCCGCAGCCATGTCGATGATGACCTTTTGGCTA-ATCTCCCACACGGT 30664 Query 146763 TTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATAGAGCCCTTGTG 146822 |||||||| |||| | || || ||||| || ||||||| || || ||||| ||| Sbjct 30663 CCTGTACAGCGCCTTGATGCGGTCAGGAATGCCAGCAATGTTCTGGATCGAGCCGCCGTG 30604 Query 146823 CGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAA-AGGTTTAGTTTAATGAGGTCATCAA 146881 |||| ||| | || | | | | ||| | ||| || | | ||| || | Sbjct 30603 TGCAATAATCTT-TTGCTTCATAGAGTCGTTCCAGAGGCCGAGCTCGACGAGTTCGCGCA 30545 Query 146882 TTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGC 146941 | || | |||||||| || |||||||| |||||||| || | | || | |||| Sbjct 30544 GGAGCCACGGGTTGACCACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGC 30485 Query 146942 TAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCA 147001 | ||| | |||||||| |||| ||| ||| | || ||| ||| | || || |||| Sbjct 30484 TCGTGTAGGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCA 30425 Query 147002 TGTACGCCACCAACAATGAATTTCGCAGACCGTAC---GCACGGATGTTGTCCTTCAAAG 147058 | |||| | || || || || ||||||| | ||| || | | |||| | | Sbjct 30424 TCGGTGCCATGAGCAGCGAGTTGCGAAGACCGTGCTGTGCA---ATCTGGGCCTTGAGCG 30368 Query 147059 TTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTC 147118 ||| ||||| | || || || |||||||||||| || || | | || Sbjct 30367 AGGTCCAATCCCATAGGTCCGTCGGTGTGCGGTTCCACATGTCATATTGCAAAAGGCCCT 30308 Query 147119 GACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGC-GCCAATTCACAG 147177 | ||| |||||||| || | || |||| |||| | | || |||| || ||| Sbjct 30307 GCGAGGCAGGACTGCCCTCGTAGGTCTCGTAGGGGCCGTA-CTCGGCCGCCAGCTCGCAG 30249 Query 147178 CTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCT 147237 || ||| || ||| ||| ||| || || || ||||| ||| |||| || Sbjct 30248 CTGCGCTCAAGGGCTGCATGGTAGATTGTCTCAAATATTTGCACGTTCAGGAGACGAGCC 30189 Query 147238 TCTTCGCTCTCGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACC 147296 || | ||| || | || ||| | || | || ||| || || |||| ||||| | ||| Sbjct 30188 TCCTGGCTGTCAAACGG-ATAGCCCATGATCATAAAAGCGTCCGCCAGGCCCTGAACACC 30130 Query 147297 GACGCCGATAGGTCGATGC----TTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGT 147352 || ||||| || || || | |||| ||| |||||| | | ||| |||| Sbjct 30129 GATACCGATGGGGCGGTGGCGCATATTCGA----GCGACGTGCGCTCTCCACGGGGTAGT 30074 Query 147353 GGTTGCGATCAATAATCTTGTTGAGGTTAC-GCACTACAACTTTAGTTATTGTTTTGAGT 147411 ||| || || || ||| ||||| |||| || || || | | | || Sbjct 30073 AGTTAATGTCGATGATGCGGTTCAGGTTCTTGCAC-ACCACCTTCGACACATCGTGCAGG 30015 Query 147412 TTCTCGAAATCATAAGTCCCGTCTTCGACACG-------------TACGCATTGGTTCAC 147458 || ||| | || |||||| ||| || || | | || || Sbjct 30014 CGCTGGAAGTTGTA-----CGTCTTGGACGCGCCAGTGCCTTCAATAAACGTCGG--CAG 29962 Query 147459 GGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTT 147517 ||||| || ||||| ||||| |||||||||||||| |||| |||||||| | ||| | Sbjct 29961 AGCGATCGAGGCCAGGTTGCATACGGCCGTCTCTTCCGGCGA-GCTGTACTCGATGATCT 29903 Query 147518 CGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGC 147577 ||| |||||||||| || || || |||| || | ||| ||||| || || ||| Sbjct 29902 CGGTGCACAGGTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGG 29843 Query 147578 ACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACC 147637 || ||| ||| | || ||| |||| || ||||| | || | || | || | Sbjct 29842 CCGAGTCCTTGTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCTCCAAAATGG-CG 29784 Query 147638 TATG-CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCG 147696 || || | |||||| || || | || ||||| ||||| |||||| Sbjct 29783 TACCACAACTTCTGCGCCTTGACAGAGCGCTTAGCACGCCCCTCACGCTCGTAACGCTCG 29724 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 ||||| |||||||| ||||| ||||| || | || ||||| |||| || ||| Sbjct 29723 TACAAAGCTTCAAACTCCTCGCCATAGCAGTCAGACAGACCGGGGCACTCGGCAGGGCAC 29664 Query 147757 ATCAGCGACCACATGTC----GTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCA 147812 ||||||||||| ||| || || | |||||| ||||||||||| || || | ||| Sbjct 29663 ATCAGCGACCA---GTCCCCATTCTGC-TCAACGCGACGCATAAACAGGTCGGGGATCCA 29608 Query 147813 CAGCGCGTACATAAGATC----GCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCA 147868 ||||||| | | || |||||| | | |||| | || | ||||| || Sbjct 29607 CAGCGCGAGGAACAAGTCGCGTGCGCGCACTTC-TTCCTTGCCGTGGTTCTTGCG---CA 29552 Query 147869 AATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTT 147928 | | | | | | || | ||||||||| || | ||| | ||| | || ||| Sbjct 29551 GGTCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTG 29492 Query 147929 TACGC---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGG 147985 ||| || |||||||| || || | |||| | | ||||| |||| || | ||||| Sbjct 29491 GGCGCTTGTTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGG 29432 Query 147986 GTTCCAGGCCGCT-CGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACT 148044 | | | ||| | | || |||||| ||| | || | ||| || || | Sbjct 29431 GCACAATACCGTTACTCA-CGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATG 29373 Query 148045 TCGTGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAA 148103 | ||| | ||| | ||||||||| || ||||| ||| || || || ||| || | Sbjct 29372 TTGTGGATGTTCAGGCCAATGCCACCGGCCGT-CTTGGAGAT--CATGGCACACGTCTTG 29316 Query 148104 TGTCGTG---TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACA 148160 | |||| || ||||| || || |||| || | | | | || ||||| | Sbjct 29315 AG-CGTGTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGA 29257 Query 148161 CATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTT 148220 ||| || || |||| ||||| ||| ||||| || ||||||||| || || Sbjct 29256 CATCTGAGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTT 29197 Query 148221 TTGACTCATCATGCGATACGTCTCAATAGC-GTCTTCGATGTCGTCGCCGTGAATGCCCA 148279 | ||| | ||||||||||| || |||| ||| || |||||||| || || | Sbjct 29196 CTCGGACATGTAGTTGTACGTCTCAATGGCACTCTT-GATATCCTCGCCGTGGATACCAA 29138 Query 148280 GCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAA 148339 || || ||||||||||||||||| || || |||||||| | | ||||||| || | Sbjct 29137 CAGCCACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCA 29078 Query 148340 GATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAG 148399 | || || || || ||| | || || | ||||| | ||| || |||||||| Sbjct 29077 GGTAAGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAA 29018 Query 148400 CGATGGCCGCATCTAGTGTCTCA 148422 || |||| || || || ||| Sbjct 29017 TGACAGCCGAGTCGAGCGTGTCA 28995 >seq44 Length=593318 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || ||||||||||||||||||| |||||| || |||||||| ||||||| | Sbjct 377964 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGCTTACCGGCGAA 378023 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| ||||||||||| || || || || || || || || || || || | | Sbjct 378024 GATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 378083 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || || | | || || || | ||| | ||| || ||||||||||| || | Sbjct 378084 GTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 378143 Query 132112 GAAAATCTGCATG 132124 ||| || |||||| Sbjct 378144 GAAGATTTGCATG 378156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610634024200