Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq31 275 9e-68 seq56 118 2e-20 seq44 93.3 6e-13 >seq31 Length=72577 Score = 275 bits (304), Expect = 9e-68 Identities = 413/570 (72%), Gaps = 20/570 (4%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||| ||| || ||| | ||||||||||| ||||| || |||||||| | Sbjct 17845 GAGCCGCTCCTGAAGGAGAACAAGTCGCGCTTTGTCCTTTTCCCTATTCGCTACCACGAG 17786 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||| | |||||| || ||||| |||||||| || |||||||| || ||| | ||||| Sbjct 17785 ATCTGGCAGATGTAC-AAGAAGGCGGAGGCCTCGTTCTGGACCGCTGAAGAGATGGACCT 17727 Query 1455836 CGGCGCC-GACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | || ||| | | |||||| ||| ||| |||| | |||||||| || | | Sbjct 17726 -GTCGAAAGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGA 17668 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||| || || ||| |||||| ||||||||||| |||||||||| || Sbjct 17667 GCCACGTCCTGGCGTTCTTT-GCCGCCTCGGATGGCATCGTCAATGAGAACCTGGTCGAG 17609 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||||| ||||| || | | ||||| || | |||||||| || ||||| Sbjct 17608 CGCTTTAGCGCCGAGGTGCAGGCGGCCGAGGCCCGCTGCTTTTACGGCTTTCAGATTATG 17549 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||| ||||| ||||| |||||||||||||||||||||||| || || ||| Sbjct 17548 ATGGAGAACATTCACTCGGAAACGTACTCGCTCCTGATCGACACCTACATCCGTGAGCCG 17489 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC-GTCGGTGAGGAAAAAGGC 1456130 | || || | |||||| || ||||| ||| | || |||| | | | ||||||| Sbjct 17488 GAGCAGCGCGAGTATCTCTTTAATGCGATCGAGACGATCCCCGTCG-TCAAGCAAAAGGC 17430 Query 1456131 CGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187 ||||||||| || |||||| |||| | | |||||| || | ||||| || Sbjct 17429 CGACTGGGCCCTGCGCTGGATCTCGGACAA-GCGTGCCTCG----TTCTCGGAGCGCCTT 17375 Query 1456188 GTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTG 1456245 || | ||||| | ||| ||||| |||||||||||||| || |||| | ||||| || Sbjct 17374 GTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTT-TGCGTCGATCTTCTG 17316 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||| |||||||||||||| || Sbjct 17315 GCTCAAGAAGCGGGGCCTCATGCCCGGCCT 17286 Score = 176 bits (194), Expect = 6e-38 Identities = 199/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 ||| |||| || || || ||||| || ||||| | ||| |||| ||||||||||| || Sbjct 29212 GCGTCGCCAACCCTGTTCAATGCGGGTACGCCCCACCCTCAGATGTCGTCGTGCTTCCTT 29271 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | ||||||| ||||||||| |||||||| ||||||||||||||| ||| || | Sbjct 29272 GTCAGTATGAAGGACGATTCGATTGAGGGCATTTATGACACGCTCAAGACGTGTGCCATG 29331 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 ||||||||| ||||||| ||||| || | | ||||| | || || ||||| | Sbjct 29332 ATCTCCAAGACGGCCGGTGGCATTGGCCTGAACATCCACAACATTCGTGCGACGGGCTCG 29391 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | || ||||| |||||| | ||||| |||||||||||||||| || | ||| Sbjct 29392 TACATTGCTGGCACAAACGGCGTGAGTAACGGTATTGTGCCCATGCTTCGTGTGTACAAC 29451 Query 260159 GACACGGCGCGCTACGTCGACCAGTGC 260185 | || ||||||||||| || ||| || Sbjct 29452 AATACCGCGCGCTACGTGGATCAGGGC 29478 Score = 132 bits (146), Expect = 7e-25 Identities = 180/246 (73%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 1456532 GAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGC 1456591 ||||| || | || ||| | || ||| | | ||| | ||||| || |||| || ||| Sbjct 17167 GAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGC 17108 Query 1456592 ATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGG 1456651 ||||||||| | || ||||||||||||||||| ||| || |||||||| ||||||| Sbjct 17107 ATGAACGCCCGC-CTGATGTGCCAGTACATTGAGTTT-GTGGCCGACCGTCTGCTCGTCA 17050 Query 1456652 CGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATC 1456711 |||||| | ||||||||| || | || || || | |||||| || Sbjct 17049 ACCTCGGCAACCCT-AAGCACTACAACTCGACGAATCCCTTTGACTTTATGGAGAACATT 16991 Query 1456712 TCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGGC 1456770 ||||| |||||||| | |||||||||||||||||||| | ||| || ||||||||||| Sbjct 16990 TCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTCGCCGACTATGCCAAGGCCGGT 16931 Query 1456771 GTCACC 1456776 ||| || Sbjct 16930 GTCGCC 16925 Score = 132 bits (146), Expect = 7e-25 Identities = 301/451 (67%), Gaps = 18/451 (4%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| ||||||| |||||||||||| |||||||| || |||||| | || | Sbjct 29476 GGCGGCAACAAGCGCCCAGGCGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGGATGTG 29535 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | | | | ||||| |||||||||||||||| || || | |||| ||| Sbjct 29536 TTTGAATTTATCGACCTGCGCAAGAACCACGGCAAGGAAG------AAGTGCGCGCACGC 29589 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCC-- 261965 || | || || ||||||| ||||||||||||||| ||| | ||| | | Sbjct 29590 GACTTGTTCCTCGCGCTGTGGATCCCCGACCTGTTTATGCGTCGCGT--TGAGCAGAATG 29647 Query 261966 GCGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGG 262025 | ||||||||||| | ||||| ||||| ||||| ||| || |||||||||| || Sbjct 29648 GGGACTGGTCGCTGATGTGCCCTGCCGAGTGCCCCGGTCTGTCTGACTGCTATGGCGAGG 29707 Query 262026 CCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNC---GCGGACCGTCGTGC 262082 ||||| || | || ||| | ||| | ||| | Sbjct 29708 AGTTTGAAGCTTTGTACGAGCGTTACGAGCGTGAGGGGCGTGCTAAGCGCTCTGTCAAGG 29767 Query 262083 CCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACA 262142 | ||| || || | |||| |||||| | | |||||| || ||||| || | || | || Sbjct 29768 C-GCA-GA-AGTTGTGGTACGCCATTTTGGAGGCCCAGATTGAGACGGGTAATCCGTTCA 29824 Query 262143 TGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAG 262202 | | ||||||||| | | ||||| | ||||||||| ||||||||||||| | | || Sbjct 29825 TCCTGTACAAGGACTCGGCCAACCGCAAGAGCAACCAGAAGAACCTGGGCACAATTA-AG 29883 Query 262203 AG-GCCAACCTGTGCACCGAGATCGTCCAGT 262232 || |||||||||||||||||||| || ||| Sbjct 29884 AGCTCCAACCTGTGCACCGAGATCATCGAGT 29914 Score = 125 bits (138), Expect = 1e-22 Identities = 340/509 (67%), Gaps = 26/509 (5%) Strand=Plus/Plus Query 262911 ACAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCA 262970 |||||| || || ||||||||| ||||| |||| | ||||| || ||| ||||| || Sbjct 30387 ACAGCACGGTCTTCGCAACTCGCTGCTCATGGCACCGATGCCGACAGCCTCGACGAGCCA 30446 Query 262971 GATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGT 263030 |||||| ||| | |||| || ||| | |||||||||||| |||| ||| ||||| Sbjct 30447 GATCCTTGGCTTTAACGAGTGCTTTGAGCCCTACACGAGCAACATTTACATGCGTCGCGT 30506 Query 263031 GCTCTCGGGCGACTTTACCGTGGTCAACC---GCCACCTGGTCAAGCGCATGGTGGCGCG 263087 ||| | ||||| || |||||||||| | | |||| | | | | || | || Sbjct 30507 GCTGGCTGGCGAGTTCCAGGTGGTCAACCCGTGGCTCCTGCGCGAAC---TCGTCGAGCT 30563 Query 263088 CGGCCTGTGGACGCCCGACTTTCGCGACC---GGCTCATTGCGGCACAG-GGCTCGGTGC 263143 |||||| |||| ||||| | | | | | ||||| ||| | |||||| | | Sbjct 30564 CGGCCTCTGGA---ACGACTCTATGAAGCAAAAGATTATTGC-ACACGGCGGCTCGATCC 30619 Query 263144 AGGGCTTTGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGG 263203 || | ||| || | | | ||| ||||||| || | || ||||||||||| Sbjct 30620 AGAACATTG-----CTGGCATTCCTGACCG-CATCAAGGCGCTGTACAGGACCGTGTGGG 30673 Query 263204 AGGT--GCCCAACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCA 263261 || | ||| || ||| | ||| || ||||| || ||||||| | | ||| || Sbjct 30674 AGATTAGCCAAA--AGGTCATCATCGACATGGCTGCGGACCGCGGCGCTTTTGTGTGTCA 30731 Query 263262 GAGCCAGTCGCTCAACCTGTACCTCGCCGACCCGA-CGGCCGAGAGCATCACGTCGATGC 263320 ||||||| |||||| | |||| | ||| | | || ||| | |||||||||| Sbjct 30732 GAGCCAGAGTCTCAACATTCACCTAAGTGCCCCAACCTTTGGACAGC-TTACGTCGATGC 30790 Query 263321 ACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCG 263380 || || | ||| ||||||||||| ||| |||||| |||||||| || || | Sbjct 30791 ACTTTTACGGCTGGAAGAAGGGCCTCAAGACCGGCTCGTACTACCTGCGCACGCGCCCTG 30850 Query 263381 CTGCCAACGCCATTCAATTCACCGTCGAT 263409 | || | || || || |||||||| ||| Sbjct 30851 CCGCACAGGCGATCCAGTTCACCGTGGAT 30879 >seq56 Length=579417 Score = 118 bits (130), Expect = 2e-20 Identities = 175/245 (71%), Gaps = 10/245 (4%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||| | | |||||| || |||||||||||||||||| || | | ||| Sbjct 485469 TACTCGACGTACATCTACCGTGTCCTCAAGCAGGTGCACCCCGACACGGGT-----ATC- 485416 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| | ||| | || | |||||||| || | ||||| |||| ||||||| | Sbjct 485415 TCGAACAAGGCTATGGCCATTCTCAACTCGTTCGTGCAGGACATTTTCGAGCGCATCGCC 485356 Query 725019 ACCGAGGCCGGTCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGA 725076 ||||||||| ||| ||||| ||| ||||||| | ||| ||| |||| |||| Sbjct 485355 ACCGAGGCC--TCGAAGCTGGCCAGCTACAACAAGAAGAGCACCATCTCGTCGCGTGAGA 485298 Query 725077 TCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGG 725136 ||||||| || |||||||||||| | | || || ||| | | |||||| | | |||| Sbjct 485297 TCCAGACGGCTGTGCGCCTGATCCTCCCTGGTGAGCTGTCGAAGCACGCTATTGCTGAGG 485238 Query 725137 GCACC 725141 |||| Sbjct 485237 CCACC 485233 >seq44 Length=593318 Score = 93.3 bits (102), Expect = 6e-13 Identities = 321/487 (66%), Gaps = 23/487 (5%) Strand=Plus/Minus Query 165441 CGACTGTTGGTCGTCGTCGGTCCGTGTTCGGCACACGACCCGGACGCCGTTGTCGAGTAT 165500 || ||| ||||||| || || || || || ||||||||||| || | ||||||| Sbjct 340828 CGCCTGCTGGTCGTAGTGGGCCCCTGCTCCATCCACGACCCGGATGCTGCCCGCGAGTAT 340769 Query 165501 GGTCGGCGGTTGCGCGCCCTCGTACGGGCCGAGGTCGACG-ACGCCCTTTGTGTGGTCAT 165559 | ||||| || | |||||| | || | | || | | | ||| |||||||| Sbjct 340768 GCGCGGCGTCTGAAGGAGG-CGTACGAGTCGCGCTGGAAGGATGGCCTG---GTGGTCAT 340713 Query 165560 ---GCGCGCCTATGTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGA 165616 ||| ||||| | || ||||| ||||||||||| || ||||| |||||| || || Sbjct 340712 TATGCGGGCCTACTTTGAGAAGCCCCGCACGACCGTGGGCTGGAAAGGCCTGATCAACGA 340653 Query 165617 CCCCGATCTTGATGGCTCGTGCCGCCTGGCTGATGGCCTTGATACATCGCGCCGCCTGCT 165676 ||| | || || ||||||| || | | ||||| | ||| || |||| ||| Sbjct 340652 CCCGAACCTGGACGGCTCGTTCCAGATCAACAAGGGCCTGCA--CATTGC-CCGCAAGCT 340596 Query 165677 GCGTGATCT-CGTCGTCGACGTCGACCAACCCGTGGCCGTCGAGTTTCTCAGTCC--TCT 165733 | | ||| | | ||| ||| | || || || ||| | ||| | ||| Sbjct 340595 AC-TCATCGACATTAACGAGATCGGTCTTCCTGTTGCGTGCGAAGTGCTCGACACGATCT 340537 Query 165734 GGTGGCCC--CCTATTTGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACC 165791 | || ||||| | || ||| | ||||||||||| | |||||||| |||||| Sbjct 340536 CGCCGCAGTACCTAT----CCGATCTGTACGCGTGGGGCGCCATTGGTGCGCGGACCACC 340481 Query 165792 GAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAAC 165851 ||| ||| ||||||||||| | | |||| || || |||| |||||||| || ||| Sbjct 340480 GAGTCACAGCTGCACCGCGAGCTCGTATCGGGCTTGTCGATGCCGATTGGCTTTAAGAAC 340421 Query 165852 AGCACCGACGGCAGCGT-GGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACA 165910 ||||||||| | | |||| ||| | |||||| | ||| | | ||||||| || Sbjct 340420 TCGACCGACGGCGGTATCGGCG-TGGCTGTGGATGCCATCCGCGCGTCGTCCCAGCCCCA 340362 Query 165911 CACCTTT 165917 | | ||| Sbjct 340361 CGCGTTT 340355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177802037075390