Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq44 125 6e-24 seq70 113 4e-20 >seq44 Length=593318 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| ||| || ||| || |||| || ||||||||||| Sbjct 377959 GTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGCTTACCG 378018 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||| ||||||| || | | |||||||||| |||||| ||| Sbjct 378019 GCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 378078 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| ||||| ||||| | ||||||||| || || |||| ||| Sbjct 378079 ACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTCAGAGTC 378138 Query 35720 TTCACAAATATCTGCAT 35736 || || || || ||||| Sbjct 378139 TTGACGAAGATTTGCAT 378155 >seq70 Length=538529 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| ||| || || || | || ||||||||||| || Sbjct 173959 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCG 174018 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| |||| ||||| ||||||| || | | |||||||||| |||||| |||| Sbjct 174019 GCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTC 174078 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||||| || |||||||| | |||||||| || || |||| || Sbjct 174079 ACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTC 174138 Query 35720 TTCACAAATATCTGCAT 35736 || || || | ||||| Sbjct 174139 TTGACGAACACTTGCAT 174155 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || || | | ||| | ||| | ||| |||||||| ||||| ||||| || | Sbjct 83527 CCACCGCGCAAACGAAGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCACTC 83468 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| | || ||||||||||| |||||||| |||| || || ||||||| || Sbjct 83467 AATGTTCGTCCATCCTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCCGGTGGG 83408 Query 35630 ACGCTCTCCTTGTCCATGATCTT 35652 | | ||||||||| |||||| Sbjct 83407 ATTCCTTCCTTGTCCTGGATCTT 83385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793064682600