Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq31 201 1e-46 >seq31 Length=72577 Score = 201 bits (222), Expect = 1e-46 Identities = 905/1411 (64%), Gaps = 51/1411 (4%) Strand=Plus/Minus Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763 || ||| ||||| | ||||| || |||||||| || ||| || | ||| || || Sbjct 30498 CATGTAAATGTTGCTCGTGTAGGGCTCAAAGCACTCGTTAAAGCCAAGGATCTGGCTCGT 30439 Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823 |||||||| ||||| |||||||| | || ||| |||||||| | || || | Sbjct 30438 CGAGGCTGTCGGCATCGGTGCCATGAGCAGCGAGTTGCGAAGACCGTGCTGTGCAATCTG 30379 Query 110824 TTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 ||||||| ||| || ||| | | | ||| | |||| |||||||| | Sbjct 30378 GGCCTTGAGCGAGGTCCAATCCCATAGGTCCG-TCGGTGTGCGGTTCC-ACATGTCATAT 30321 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 || | | || || || || ||| ||||| |||| || |||| || | | | Sbjct 30320 TGCAAAAGGCCCTGCGAGGCAGGACTGCCCTCGTAGGTCTCGTAGGGGCCGTACTCGGCC 30261 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 |||| || ||||| ||| |||| ||| || || || || ||||| || | | ||| Sbjct 30260 GCCAGCTCGCAGCTGCGCTCAAGGGCTGCATGGTAGATTGTCTCAAATATTTGCACGTTC 30201 Query 111002 ATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 | || || | ||| ||||| | |||| | ||||| | ||||| | Sbjct 30200 AGGAGACGAGCCTCCTGGCTG--TCAAACGGATAGCCCATGATCATAAAAGCGTCCGCCA 30143 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119 | || |||||||| | ||| || || | ||| |||||||| || || || |||| | Sbjct 30142 GGCCCTGAACACCGATACCGATGGGGCGGTGGCGCATATTCGAGCGACGTGCGCTCTCCA 30083 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 |||| || | || |||| |||| ||||| || || ||| || | ||| | | | Sbjct 30082 CGGGGTAGTAGTTAATGTCGATGATGCGGTTCAGGTTCTTGCACACCACCTTCGACACAT 30023 Query 111180 CATG----------AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTT 111229 | || ||||| | | | | | | || ||| ||||| | | || | Sbjct 30022 CGTGCAGGCGCTGGAAGTTGTACGTCTTGGAC-GCGCCAGTGCCTTCAATAA---ACGTC 29967 Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || ||||| || |||| ||||| || |||||||| ||| ||||||| | Sbjct 29966 GGCAGAGCGATCGAGGCCAGGTTGCATACGGCCGTCTCTTCCGGCGAGCTGTACTCGATG 29907 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| |||||||| || |||| ||||| ||||| ||||| | Sbjct 29906 ATCTCGGTGCACAGGTTGGAGCTCTTAATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGG 29847 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||| || |||||||| || ||| | || | |||||||| |||| | | | ||| Sbjct 29846 TTGGCCGAGTCCTTGTACAGGATGAACGGATTACCCGTCTCAATCTGGGCCTCCAAAATG 29787 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| ||| || ||| || | ||| | || || || ||||| |||||| Sbjct 29786 GCGTACCACAACTTCTGCGCCTTG-ACAGAGCGCTTAGCACGCCCCTCACGCTCGTAACG 29728 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTG 111527 ||| | |||||||||||||| ||| || ||| || ||||| || || | | | Sbjct 29727 CTCGTACAAAGCTTCAAACTCCTC-GCCATAGCAGTCAGACAGACCGGGGCACTCGGCAG 29669 Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 | || | || ||||| | ||| | |||||| || ||| || ||||| || |||| Sbjct 29668 GGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATCC 29609 Query 111588 ACA--GGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| | || ||| | || || | || | ||||| | || ||||| || | Sbjct 29608 ACAGCGCGAGGAACA-AG-TCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAG 29551 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 111702 || | || || | | ||||| |||||| ||||| || || | || | | || Sbjct 29550 GTCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGG 29491 Query 111703 ---CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 ||| | | ||||| |||| || |||||||| || ||| | || ||||||| Sbjct 29490 GCGCTTGTTGCCGCCC----TGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCA 29435 Query 111759 TTGGAATAATACCAT--CTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCT 111814 | || | |||||| | || | || ||||| || || |||||| | || Sbjct 29434 TGGGCACAATACCGTTACTCA--CGCCGTTTGTGCCAGCAATGTACGAG--CCCGTCGCA 29379 Query 111815 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 111874 | | | ||||||| || ||||| || || ||| ||| ||||| |||||| | Sbjct 29378 CGAATGTTGTGGATGTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTC 29319 Query 111875 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 111934 | || || |||| || || | || || || ||||| | || ||||||||| Sbjct 29318 TTGAGCGTGTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGAC 29259 Query 111935 GACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA 111994 |||||||| || || ||||| |||||||| |||||||| | ||||| |||| | Sbjct 29258 GACATCTGAGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAA-AGC 29200 Query 111995 CCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 112053 | | | |||||| | || ||| ||||| | | || | || || || |||||||| || Sbjct 29199 CTTCTCGGACATGTAGTTGTACGTCTCAATGGCACTCTTGATATCCTCGCCGTGGATACC 29140 Query 112054 GATTGCGACCCGCATGAACATGTACTGTGGG 112084 | || || ||||||| ||||| ||| ||| Sbjct 29139 AACAGCCACACGCATGAGCATGTGCTGAGGG 29109 Score = 113 bits (124), Expect = 6e-20 Identities = 306/457 (67%), Gaps = 10/457 (2%) Strand=Plus/Plus Query 122369 CATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCA 122428 ||||||| |||| || ||| || ||||| | ||| || | || |||||| |||| Sbjct 16942 CATAGTCGGCGACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAAATGTTCTCCA 17001 Query 122429 TAAAGTCAAATGGATTCTTCGCGTTCCAAATGGGT--GGCACCCCAACTTGTTTGAGGAG 122486 |||||||||| |||||| ||| ||| | || | || || | ||| ||| || Sbjct 17002 TAAAGTCAAAGGGATTCGTCGAGTTGTAG-TGCTTAGGGTTGCCGAGGTTGAC-GAGCAG 17059 Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT 122546 ||| || | |||| |||||||||||| | ||||| | |||||| || || || Sbjct 17060 ACGGTCGGCCACAAACTCAATGTACTGGCACATCAGGCGGGCGTTCATGCCAATCAGCG- 17118 Query 122547 ACATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 | | ||| || ||||| | || | | |||||| | || ||||| | | |||| Sbjct 17119 AGACGGGCAGAGCGTCGGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCCGTAATGATGC 17178 Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCT-TGAAGAGCTCCACGGCAAAC 122664 || | || |||| ||||| | | | || | ||||| |||||| Sbjct 17179 GGTTCACTGTGTCGGG-GTGGGCGCGCTTCTTCAGGTGGCTAAAGAGGAGGCAGGCAAAG 17237 Query 122665 TCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATG 122724 || ||| ||||| || || || ||||| || || || ||||| | || || |||||| Sbjct 17238 TCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGGCCGGGCATG 17297 Query 122725 AGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTC 122783 || ||||||||||| | ||| | || | |||| || || || ||||| ||||||||||| Sbjct 17298 AGGCCCCGCTTCTTGAGCCAGAAGATCGACGCA-AACGAACCCGAGAAAAAGATACCCTC 17356 Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 ||| ||||| || | |||||| || | ||| ||| Sbjct 17357 CACGGCTGCAAAAGCCACAAGGCGCTCCGAGAACGAG 17393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031254212000