Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq13 205 3e-47 >seq13 Length=613175 Score = 205 bits (226), Expect = 3e-47 Identities = 917/1439 (64%), Gaps = 33/1439 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || || || ||||| || || |||||||| || || ||||| || || ||| Sbjct 319517 GCTGTTGGTATTGACTTGGGTACGACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 319458 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| ||||| || || ||| | || || || || ||||| || || ||| Sbjct 319457 GTCGAGGTCATTGCCAATGACCAGGGCAACCGTACGACCCCCTCGTACGTCGCCTTCACC 319398 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || ||||||||| |||| ||||| | || || || || | || || || | || Sbjct 319397 GACACTGAGCGTCTGATCGGTGACGCCGCCAAGAACCAGGTGGCCATGAACCCCCACAAC 319338 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435 || || || || |||||||| || || || | ||||| | || | || | || Sbjct 319337 ACTGTCTTCGACGCTAAGCGTCTGATCGGCCGCAAGTTCAGCGATGCCGAAGTT---CAG 319281 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGA---TAAACCAATT 349492 || || | || || | || || | || | ||| ||| ||| || | Sbjct 319280 TCGGACATGAAGCACTGGCCCTTCGCCGTCATC------GACCGTGCCGGTAAGCCTGTC 319227 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAA 349550 ||| ||||| || || ||||| | || | ||| |||| || || ||||| || | Sbjct 319226 ATTCGCGTTGAGTACAAGGGTGAGGAGAAG--ACTTTCACCCCTGAGGAGATTTCCTCCA 319169 Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGAT 349609 |||| | | || ||| || | || || || || | || | || || | || Sbjct 319168 TGGTCCTCCTCAAGATGCGTGAGACCGCCGAGGCTTACCTGGGCTCGGAC-GTGAAGGAC 319110 Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || | ||||| || ||||| || || || | |||||| || || || || ||| Sbjct 319109 GCCGTGGTCACTGTCCCTGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCT 319050 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || ||| | | || || || || ||||||||||| || ||| Sbjct 319049 GGTGTCATTGCCGGTCTGAACGTTATGCGTATCATCAACGAGCCCACTGCTGCTGCCATT 318990 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || | | ||| | || || || | ||||| || || | ||| Sbjct 318989 GCCTACGGTCTCGACAAGAAGGACGACAAGGAGAAGAACGTCCTTATCTTCGACCTGGGT 318930 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||| |||||||| || || || || | || ||||| || || || || || || Sbjct 318929 GGTGGTACCTTTGATGTGTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCC 318870 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||| ||||| || || | ||||| || || ||||| || ||||| || || ||| Sbjct 318869 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTTGACAACCGTCTGGTCAACCACTTT 318810 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || ||||||| ||||| |||| || | || | || || | || | || Sbjct 318809 GTGCAAGAATTCAAGCG-CAAGAACAAGAAGGACCTGACCACGAACGCTCGTGCTCTCCG 318751 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 ||| || | ||||| | || ||||| ||||| | | || || | |||| ||| | Sbjct 318750 TCGTCTGCGCACTGCTTCGGAGCGTGCCAAGCGCACTCTCTCGTCGGCCGCCCAGACCAC 318691 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 ||||| ||||| || || || || | || |||| | || || || ||||| || Sbjct 318690 CATTGAGATTGACTCGCTCTTCGAGGGTATCGACTTCTACACTTCGATCACTCGTGCCCG 318631 Query 350089 GTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147 || || || | || || || || | | | || || || |||||||| || || Sbjct 318630 CTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCAC-ACCATTGACCCTGTGGAGAAGGTGC 318572 Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTT----TAGTTGGTGGT 350203 | || || || || ||| | | | |||| || || | || |||||| Sbjct 318571 TCCGCGACGCCAAGATTGACAA----GGGCTCGGTGAACGAGATTGTCCTGGTCGGTGGT 318516 Query 350204 TCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT 350263 || || ||||| || || || || | || || ||||| || ||| || ||| Sbjct 318515 TCGACCCGTATCCCTCGTGTGCAGAAGCTGCTCCGCGACTTTTTCAACGGCCGCGAGCCT 318456 Query 350264 TCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATT 350323 | || || || || || || |||||||| || ||||| ||||| ||||| | ||| Sbjct 318455 AACAAGTCGATCAACCCCGACGAGGCTGTTGCTTACGGTGCCGCTGTCCAGGCCGCCATT 318396 Query 350324 TTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 | || || | | | || | | || || || || || ||||| | || ||| Sbjct 318395 CTGTCGGGTGACACGTCCGAGAAGACGCAGGACCTCTTGCTGCTCGATGTCGCCCCTCTT 318336 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 ||| | || | || || |||||| || | ||| ||| || | || | ||| Sbjct 318335 TCGATGGGTATCGAGACCGCTGGTGGTGTCTTCACTCCTCTGATCAAGCGTAACACTACG 318276 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 || ||||| || ||||| | || || || | || || || ||||| | || Sbjct 318275 GTGCCTACCAAGAAGTCGGAGGTCTTCTCGACTTACGCCGACAACCAGCCTGGTGTGTTG 318216 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || || || || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 318215 ATCCAGGTGTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTGGGTAAGTTT 318156 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGA 350622 || | ||||| || ||| | || || |||||||| |||||| | ||||| Sbjct 318155 GAGCTCTCGGGCATTCCCCCGGCGCCGCGTGGTGTCCCTCAGATCGAAGTCACCTTCGA 318097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252555651285