Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq70 167 5e-36 seq44 143 6e-29 >seq70 Length=538529 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||||||| ||| || |||||||| || || || || | ||||| Sbjct 173944 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCC 174003 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| ||||| |||||||| || || | || ||||||||| Sbjct 174004 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 174063 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| ||||| || || ||||| || ||||||||| Sbjct 174064 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 174123 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || ||||| ||||| Sbjct 174124 TTCCCGGTCAGGGTCTTGACGAACACTTGCAT 174155 Score = 98.7 bits (108), Expect = 2e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || || || || || ||| ||| || || || || || || | ||| | || | ||||| Sbjct 83512 AGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCACTCAATGTTCGT-CCATC 83454 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||||||||||| || || || || |||||||||||||| || || | |||||||||||| Sbjct 83453 CTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCCGGTGGGATTCCTTCCTTGTC 83394 Query 211022 CTGGATCTTTTGTTTCAC 211039 ||||||||| |||||| Sbjct 83393 CTGGATCTTGGTTTTCAC 83376 >seq44 Length=593318 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || || ||||| || || ||||| | || || Sbjct 377944 AGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCC 378003 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || |||||||| || || | || ||||||||| Sbjct 378004 TCGAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 378063 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| ||| ||||||||| || ||||||||| Sbjct 378064 TGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTC 378123 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | ||||| Sbjct 378124 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 378155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150589094675