Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq70 152 1e-31 seq44 143 6e-29 seq72 131 4e-25 >seq70 Length=538529 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| |||||| || || |||| ||||| ||| || ||| | ||||| Sbjct 173944 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCC 174003 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || |||||||| || || ||||| |||||||| Sbjct 174004 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 174063 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| ||||| || | ||||| || | ||||||||| Sbjct 174064 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 174123 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| || || | |||||||||||| Sbjct 174124 TTCCCGGTCAGGGTCTTGACGAACACTTGCAT 174155 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| ||| || || || | |||||| || ||| |||| ||||| Sbjct 83512 AGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCACTCAATGTTCGTCCATCC 83453 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || || ||||||||||| || || || ||||||||||| Sbjct 83452 TCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCCGGTGGGATTCCTTCCTTGTCC 83393 Query 225622 TGGATCTT 225629 |||||||| Sbjct 83392 TGGATCTT 83385 >seq44 Length=593318 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||| || || || | ||||| ||| || || | || || Sbjct 377944 AGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCC 378003 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || |||||||| || || ||||| |||||||| Sbjct 378004 TCGAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 378063 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| |||||||||| ||| || || | |||||||||| Sbjct 378064 TGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTC 378123 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | |||||| Sbjct 378124 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 378155 >seq72 Length=27069 Score = 131 bits (144), Expect = 4e-25 Identities = 189/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 7453 ATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGGTTAGAA 7512 || |||| || || || || || ||||||| || || || | |||| | ||| Sbjct 5106 ATCTTTGCTGTATTCTCAGGACTTCTAGGTACAATGTTCTCAGTTCTTATCCGAGCTGAA 5165 Query 7513 TTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTTATTATT 7572 |||||||||| ||| ||| | | |||| || ||||| | |||||||||||| Sbjct 5166 CTAGCTGCTCCTGGTGTACAAGTTCTTGGTGGAAACCATCAACTATTTAACGTTATTATT 5225 Query 7573 ACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTC 7632 || || ||||| ||| ||||||||||||| | || ||||| | | | || || ||||| Sbjct 5226 ACTGCTCATGCATTTCTTATGATTTTCTTCATGGTAATGCCTGCTCTAATGGGTGGTTTT 5285 Query 7633 GGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAAC 7692 || || | ||||| || | ||||||||||| |||||||||||| || | || || Sbjct 5286 GGTAACTACTTCGTACCAGTTATGATTGGTGCAGTTGATATGGCTTTCCCTCGACTAAAT 5345 Query 7693 AATATAAGTTTTTGATTACTACCGCCT 7719 ||||| ||||| || |||| || ||| Sbjct 5346 AATATTAGTTTCTGGCTACTTCCTCCT 5372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529748465930