Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq70 147 2e-30 seq44 140 2e-28 >seq70 Length=538529 Score = 147 bits (162), Expect = 2e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| ||||||||||| ||||||||||| ||| || ||| | || || Sbjct 173946 CACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTC 174005 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||||||||||| ||||| || || | || | ||| ||||| ||| Sbjct 174006 CAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTG 174065 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || ||||||| || |||||||| | || |||||||| Sbjct 174066 GATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTT 174125 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||||||| ||||| | ||||||| Sbjct 174126 CCCGGTCAGGGTCTTGACGAACACTTGCATG 174156 >seq44 Length=593318 Score = 140 bits (154), Expect = 2e-28 Identities = 160/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||||||||||| || |||||||| ||| || || |||| || Sbjct 377946 CACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTC 378005 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| |||||| || || | || | ||| ||||| ||| Sbjct 378006 GAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTG 378065 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||| | |||||| ||||| | ||| |||||| Sbjct 378066 GATCTTGGCCTTGACATTGT--CGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTC 378123 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || || ||||| ||||||||||||||| Sbjct 378124 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 378156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989983198615