Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq44 138 3e-27 seq70 129 1e-24 >seq44 Length=593318 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || || |||||||| || ||||| ||| ||||||| Sbjct 378152 CAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTCAGAC 378093 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || ||||| |||||||| || Sbjct 378092 ACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAACAG 378033 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || ||| || ||| | Sbjct 378032 CGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACAACATT 377973 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 377972 CAGAAGGAGAGCACCCTGCACCTCGT 377947 >seq70 Length=538529 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || || || || || ||||||||||| |||||||| || ||| Sbjct 174152 CAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 174093 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || || ||||| |||||||| || || ||||| |||||||| || Sbjct 174092 ACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAACAG 174033 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || ||||| || ||||| | ||||| ||| || ||| || Sbjct 174032 CGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAACATC 173973 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 173972 CAGAAGGAGAGCACTCTTCACCTTGT 173947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729734833430