Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001265015.1_202015-08-11] 95 sequences; 7,607,075 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq70 154 1e-32 seq44 154 1e-32 >seq70 Length=538529 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || |||||||||||||| ||||| |||||| Sbjct 173929 CCACCACGCAGACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 173988 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||||||||| || ||||||||||||||||||| ||| Sbjct 173989 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGGGGG 174048 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | |||||| ||||||||| Sbjct 174049 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 174108 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || | || ||||| || || ||||| ||||| ||||| | |||||| Sbjct 174109 TCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCATG 174156 Score = 122 bits (134), Expect = 8e-23 Identities = 181/255 (71%), Gaps = 25/255 (10%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| | ||| | ||| ||||| |||||||||||||||||||| || ||||| Sbjct 83529 CGCCACCGCGCAAACGAAGCACGAGATGGAGCGTGCTCTCCTTCTGAATATTGTAGTCAC 83470 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | || || | || || |||||||| || || || |||||||| |||||||||| | Sbjct 83469 TCAATGTTCGTCCATCCTCCAGCTGCTTTCCCGCAAAAATCAGGCGTTGTTGGTCCGGTG 83410 Query 41754 GAACGCTCTCCTTGTCCATGATTTT-----------TTGCTTCAACG--ACGAC--ACAG 41798 | | | ||||||||| ||| || ||| | | | | || || || Sbjct 83409 GGATTCCTTCCTTGTCCTGGATCTTGGTTTTCACTGTTGTTACCAAGGCACTACGTACCA 83350 Query 41799 TG-TCGCTCGACTC--------CAC-CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 || ||| | || || ||| ||||| ||| |||||||||||||| ||||||||| Sbjct 83349 TGCTCGATAGAGTCACTGCTCTCACACTCCAACGTAATCGTTTTACCCGTGAGCGTCTTT 83290 Query 41849 ACGAAAATCTGCATG 41863 ||||||||||||||| Sbjct 83289 ACGAAAATCTGCATG 83275 >seq44 Length=593318 Score = 154 bits (170), Expect = 1e-32 Identities = 163/213 (77%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || ||||| |||||||||||||||||||| |||||| ||||| || |||| || Sbjct 377946 CACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTC 378005 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| |||||||| ||||| ||||||||||||| ||| | | |||||||||| Sbjct 378006 GAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTG 378065 Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||| || | || | ||||| || || ||||| | ||| ||||| Sbjct 378066 GATCTTGGCCTTGACATTGTCG--ATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTC 378123 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || |||||| Sbjct 378124 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 378156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303451014000