Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8 125 8e-24 >seq8 Length=423986 Score = 125 bits (138), Expect = 8e-24 Identities = 387/593 (65%), Gaps = 18/593 (3%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || || ||| ||| ||||| ||||| | ||| | ||||| || |||| || Sbjct 365623 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 365682 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| ||||| ||||| || ||||| || || |||||||| || || || || || Sbjct 365683 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 365742 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCT-GTCATG 24310 || || || || || ||||| || | ||| | || | | ||| | |||| ||| Sbjct 365743 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 365801 Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 ||||| | ||||| |||||||| | || || || || ||||| || ||||| Sbjct 365802 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 365861 Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTA----TCAATCAAAAGACTAT 24426 ||||||||| | | | || | || ||||| || |||| || | Sbjct 365862 AAAGAGATA----CTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGT 365917 Query 24427 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 24486 || ||||||| |||||||| || || || ||||| ||||| || || | ||||||| Sbjct 365918 ACGTTTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGG 365977 Query 24487 TAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 24546 ||| || || | ||| || || | | || ||||| || || || || || Sbjct 365978 CCGCCTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGG 366037 Query 24547 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTA 24602 | ||||| ||||||| || || | | ||| | || | || ||| | | Sbjct 366038 CGGCAAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCAT-TGTCGTTCATGCGGTGG 366096 Query 24603 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 24662 | ||| || | | ||||| || | |||| ||||| | ||||| || || ||||| Sbjct 366097 TCCCAGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCC 366156 Query 24663 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 ||||| || ||||| | |||||| || || || |||| || |||| ||||| Sbjct 366157 GCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 366209 Score = 125 bits (138), Expect = 8e-24 Identities = 353/535 (66%), Gaps = 8/535 (1%) Strand=Plus/Minus Query 54133 ATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTG 54192 ||| || ||||| || |||| ||| |||| | | || || || ||||| || ||||| Sbjct 377926 ATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTGTTGCCGCCCTG 377867 Query 54193 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 54252 ||| | ||| | ||||| || || || || | | ||| || | |||||| || | Sbjct 377866 ATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTTACTCAC 377807 Query 54253 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 54312 || || || || | || || || | |||||||| || || || || || Sbjct 377806 GCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGGCCAAT 377747 Query 54313 CCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTA 54371 || || ||| | || ||||| | || || ||| || | ||| ||||| |||||||| | Sbjct 377746 GCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGCGTGTCATAAATGCCCTCAA 377688 Query 54372 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 54431 | ||| ||| |||| | | || || || ||||| || | | || |||| Sbjct 377687 TCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGTACCCG 377628 Query 54432 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTC 54490 |||| || | ||| || || |||||||| || || || || | |||| ||||||||| Sbjct 377627 CATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGACATGTAG-TTGTACGTC 377569 Query 54491 TCGATAGCTGAGTCT--ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 54548 || || || | ||| |||||| || || || || || |||||||| | ||||| Sbjct 377568 TCAATGGC--ACTCTTGATATCCTCGCCGTGGATACCAACAGCCACACGCATGAGCATGT 377511 Query 54549 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTT 54608 ||||||| | || | | ||| ||| || ||||| ||| || || | || | Sbjct 377510 GCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGGTAAGAGCGCTCAAGCGTCT 377451 Query 54609 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 | || || ||| ||||||| |||||| || |||||||| | | | |||| ||| Sbjct 377450 TGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACAGCCGAGTCGAG 377396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721503520240