Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8 432 4e-116 seq1 134 1e-26 seq4 131 2e-25 seq6 118 1e-21 >seq8 Length=423986 Score = 432 bits (478), Expect = 4e-116 Identities = 613/852 (72%), Gaps = 15/852 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||| ||| |||||| || || || ||||||| || | |||| || Sbjct 366239 GAGCCGCTCCTGAAGGAGAACAAGTCGCGCTTTGTCCTTTTCCCTATTCGCTACCACGAG 366180 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| ||||||||||||| || ||| |||||||| Sbjct 366179 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACCGCTGAAGAGATGGACCTG 366120 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || || ||| | ||||||||| | || |||||||||| |||||||| || | | Sbjct 366119 TCGAAAGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGAGC 366060 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG- 116811 ||||| ||||| || || |||||| || ||||||||||| ||||| ||||||||||| Sbjct 366059 CACGTCCTGGCGTTCTTTGCCGCCTCGGATGGCATCGTCAATGAGAACCTGGTCGAGCGC 366000 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| ||||||||| || ||||| |||||||||||||| || Sbjct 365999 TTTAGCGCCG-AGGTGCAGGCGGCCGAGGCCCGCTGCTTTTACGGCTTTCAGATTATGAT 365941 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||||| ||| ||| ||| |||||||| ||| | || | | Sbjct 365940 GGAGAACATTCACTCGGAAACGTACTCGCTCCTGATCGACACCTACATCCG---TGAGCC 365884 Query 116932 GGAGAAGCTCCGTT---TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 |||| ||| | | | || || || ||||||||||| || |||||| | ||||| Sbjct 365883 GGAGCAGCGCGAGTATCTCTTTAATGCGATCGAGACGATCCCCGTCGTCAAGCAAAAGGC 365824 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGG 117047 ||| ||||| |||||||||||| | | || || | ||| | ||| |||||||| |||| Sbjct 365823 CGACTGGGCCCTGCGCTGGATCTCGGACA-AGCGTGCCTCGTTCTCGGAGCGCCTTGTGG 365765 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || ||||| ||||| |||| || ||||| || || | || || ||||||| Sbjct 365764 CTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTTGCGTCGATCTTCTGGCTCA 365705 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 |||| || |||||||||||||||||| | ||| ||||||||||| || | ||||| | Sbjct 365704 AGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGACGAAG 365645 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCGAGCGCG 117226 ||||||| |||||||||||| | || || | || || | |||| || | | || Sbjct 365644 GTCTGCACACCGACTTTGCCTGCCTCCTCTTTAGCCACCTGAAGAAGCGCGCCCACCCCG 365585 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | | || | ||| | || || || || ||||| |||||| ||| | ||||| Sbjct 365584 ACAC-AGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGAC 365526 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 || ||||| || ||| | || | || | ||||| || ||||| ||||| Sbjct 365525 GCTCTGCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTGCCAGTACATTGAGTTT 365466 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || |||||| | ||||| || | || | | | | |||||||||||| || | || || Sbjct 365465 GTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTACAACTCGACGAATCCC 365406 Query 117407 CTGGACTTTATG 117418 | ||||||||| Sbjct 365405 TTTGACTTTATG 365394 >seq1 Length=1489088 Score = 134 bits (148), Expect = 1e-26 Identities = 149/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGTGCAAACGCTCAA 40769 ||||| ||||| || ||||| | || ||||| | | |||| | || || | |||| Sbjct 496710 CTCACTGGCAAGACGATCACGCTGGAAGTCGAGTCGTCGGACACGATTGACAATG-TCAA 496652 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 || ||||||| ||||| |||||||| || ||||||| || || || |||| ||| || Sbjct 496651 GGCCAAAATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAGCGTCTGATCTTCGCCGG 496592 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| |||||||| |||| || || || | |||||||||||||||||||||| |||||| Sbjct 496591 CAAGCAGCTGGAAGACGGCCGTACGCTGAGCGACTACAACATCCAGAAGGAGAGCACGCT 496532 Query 40890 GCATCTAGTGTTGCGC 40905 || || ||| ||||| Sbjct 496531 TCACCTCGTGCTGCGC 496516 >seq4 Length=1186707 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| | || || ||| || | Sbjct 398864 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTCA 398923 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||| |||||| ||||||| Sbjct 398924 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 398983 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| || ||||| | |||||||||| Sbjct 398984 CAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACAAC 399043 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 399044 ATTCAGAAGGAGAGCACCCTGCACCTCGTG 399073 >seq6 Length=615380 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| | || || || | || Sbjct 241561 ATGCAAGTGTTCGTCAAGACCCTGACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 241502 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| |||||| ||||||| Sbjct 241501 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAA 241442 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| || | ||||| || | |||||||||| Sbjct 241441 CAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGAGCGACTACAAC 241382 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| ||| || || || ||| Sbjct 241381 ATCCAGAAGGAGAGCACTCTTCACCTTGTG 241352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219116276880