Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 seq1 93.3 5e-14 seq6 89.7 6e-13 >seq4 Length=1186707 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||||||||||| ||||| ||||| || ||| || || |||| || |||||| Sbjct 399066 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCCTCGAGCTGC 399007 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 ||||| ||||| || || ||||| ||||| | || | | |||||||||| ||| || Sbjct 399006 TTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTG 398947 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 |||| | | | |||||| ||||| || || | |||||| || ||||| || Sbjct 398946 GCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTCTTGCCAGTC 398887 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||||||||| Sbjct 398886 AGAGTCTTGACGAAGATTTGCAT 398864 >seq1 Length=1489088 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||| | || | ||||||||||| || || ||||| || ||| || || || Sbjct 496517 CGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCG 496576 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || ||||| || || ||||| ||||| | || | || ||||||| Sbjct 496577 TCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTG 496636 Query 43089 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| |||| | |||| | | | |||||| ||| || || || | |||||| Sbjct 496637 TCC-TGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCCAGCGTGAT 496695 Query 43148 GGTTTTGCCCGTTAG 43162 || ||||| || || Sbjct 496696 CGTCTTGCCAGTGAG 496710 >seq6 Length=615380 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| || |||||| || | || || |||||||| || Sbjct 241365 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCG 241424 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 || || || || ||||| ||||| | || | | |||||||||| ||| || || Sbjct 241425 GCAAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTC 241484 Query 43107 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 43166 | || | | ||||||| || ||||| || | ||||| || || || || || ||| Sbjct 241485 ACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTC 241544 Query 43167 TTTACAAAGATTTGCAT 43183 || || || | |||||| Sbjct 241545 TTGACGAACACTTGCAT 241561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817507079640