Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 127 1e-24 seq4 118 7e-22 seq6 96.9 2e-15 >seq1 Length=1489088 Score = 127 bits (140), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||| ||||| | || || || ||||| |||||||||||| | Sbjct 496505 CCACCACGAAGGCGCAGCACGAGGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 496564 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| |||| |||| |||| ||||||||| ||||| || || ||||| ||||| || Sbjct 496565 AGCGTACGGCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGAGGA 496624 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||||| ||| | || | | |||| || | ||| |||| Sbjct 496625 ATGCCCTCCTTGTC--CTGAATTTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 496682 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAG 34368 | |||| |||||| || ||||| ||||| Sbjct 496683 CTTCCAGCGTGATCGTCTTGCCAGTGAG 496710 >seq4 Length=1186707 Score = 118 bits (130), Expect = 7e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || || || ||||| |||||||||||| ||| |||| |||| Sbjct 399075 AGCACGAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCGTCC 399016 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || || ||||| ||||| ||| | | ||||||||| Sbjct 399015 TCGAGCTGCTTACCGGCGAAGATCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCC 398956 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | |||| || | ||||| || || | |||||| || Sbjct 398955 TGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAGGATTCAACCTCAAGCGTGATCGTC 398896 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 ||||| || ||||| || || ||||| ||||| || Sbjct 398895 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATGGC 398861 >seq6 Length=615380 Score = 96.9 bits (106), Expect = 2e-15 Identities = 166/240 (69%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 34153 TTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTT 34212 ||| ||| | || || ||||| | ||||| ||||| | ||| || || ||||| ||||| Sbjct 241326 TTCTTCGCA-CCACCACGCAGACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTT 241384 Query 34213 GTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTG 34272 ||||||| ||| || | || |||| ||||||||| || || || || ||||| || Sbjct 241385 GTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTG 241444 Query 34273 GTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGT 34332 ||| ||| | | ||||||||| ||||| ||| | || | |||| |||| Sbjct 241445 GTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGA 241504 Query 34333 CGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 || || || || | ||||| || || ||||| || || || || || | ||||| || Sbjct 241505 AGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGACGAACACTTGCATGGC 241564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071948813280