Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq8 122 2e-22 seq1 100 6e-16 >seq8 Length=423986 Score = 122 bits (134), Expect = 2e-22 Identities = 349/533 (65%), Gaps = 19/533 (4%) Strand=Plus/Plus Query 248892 TCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCT 248951 |||||||||| | ||||| |||||||| || || ||| || || || |||| | | Sbjct 377506 TCAGCACATGCTCATGCGTGTGGCTGTTGGTATCCACGGCGAGGATATCAAGAGTGCCAT 377565 Query 248952 CGAGACGTACACCGGAATGA--GTGAACGCTGGATGACACATGCCACACCGACGCTCTTC 249009 |||||||||| | ||| | ||| ||| | || || || | || || || ||| Sbjct 377566 TGAGACGTACAACTACATGTCCGAGAAGGCTT--TCACGCACGCGTCGCCAACCCTGTTC 377623 Query 249010 AACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGAC 249069 || || ||||| | || |||| || |||||||| ||| | ||| | ||||| Sbjct 377624 AATGCGGGTACGCCCCACCCTCAGATGTCGTCGTGCTTCCTTGTCAGTATGAAGGACGAT 377683 Query 249070 TCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCG 249126 || | || ||||||||||||||||| | ||||| || | ||| || || || Sbjct 377684 TCGATTGAGGGCATTTATGACACGCTCA---AGACGTGTGCCATGATCTCCAAGACGGCC 377740 Query 249127 GGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACA 249186 || || || || || | || |||||| || |||| ||| |||||||| || ||| Sbjct 377741 GGTGGCATTGGCCTGAACATCCACAACATTCGTGCGACGGGCTCGTACATTGCTGGCACA 377800 Query 249187 AATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTC 249246 || || || ||| | ||||| || ||| | ||||| | | ||||| | | | Sbjct 377801 AACGGCGTGAGTAACGGTATTGTGCCCATGCTTCGTGTGTACAACAATACCGCGCGCTAC 377860 Query 249247 ATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGG 249300 | | |||| ||| ||||| | || | || ||||| || |||| ||| Sbjct 377861 GTGGATCAGGGCGGCAACAAGCGCCCA---GGCGCCTTTGCCATTTACCTGGAGCCCTGG 377917 Query 249301 CACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGA 249360 ||| | ||| | || || || | ||| || |||||| ||||||| || || | Sbjct 377918 CACTCGGATGTGTTTGAATTTATCGACCTGCGCAAGAACCACGGCAAGGAAGAAGTGCGC 377977 Query 249361 GCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGT 249413 || || ||| | ||| || |||||| || ||||| |||| ||||| ||||| Sbjct 377978 GCACGCGACTTGTTCCTCGCGCTGTGGATCCCCGACCTGTTTATGCGTCGCGT 378030 >seq1 Length=1489088 Score = 100 bits (110), Expect = 6e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 115399 AATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATG 115458 || ||||| || | ||||| ||||| |||||||| ||| | || | |||||| | | | Sbjct 984085 AAAATCGCGCAGCGACTCTGGATCGGCTCGATGATCTTGTTCGATTGGTTGCATGCAAAG 984026 Query 115459 ATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCA 115518 ||| ||||||||| || ||||| |||||| | || || |||||||| ||||| Sbjct 984025 CAGAAGCGCGTCGTGGGCGCGTAAATCTCCATGGTGCGGCGTAGCGCCTGCTGGGCACCG 983966 Query 115519 GGTGTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556 || ||||| ||| ||||||||||||| | |||||| Sbjct 983965 GGCGTCATGCTGTCCGCCTCGTCGAGAATAATAATCTT 983928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766221150784