Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 426 1e-114 seq4 107 2e-18 >seq8 Length=423986 Score = 426 bits (472), Expect = 1e-114 Identities = 1246/1891 (66%), Gaps = 72/1891 (4%) Strand=Plus/Minus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 ||||| || ||||| || || | |||||| || ||||| || || ||| ||| ||| Sbjct 379272 TCCACGGTGAACTGGATCGCCTGTGCGGCAGGGCGCGTGCGCAGGTAGTACGAGCCGGTC 379213 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG--CA 22226 || || ||| ||||||| ||||||| || |||||||| | | |||| | | || || Sbjct 379212 TTGAGGCCCTTCTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGTCCAAAGGTTGGGGCA 379153 Query 22227 AGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCA 22286 | | || | |||| ||| |||||| | ||| || || || || || |||| Sbjct 379152 CTT--AGGTGAATGTTGAGACTCTGGCTCTGACACACAAAAGCGCCGCGGTCCGCAGCCA 379095 Query 22287 TATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGAT-CT 22343 | | || | || || | | | || ||||| |||||| ||||||| | |||| | Sbjct 379094 TGTCGATGA-TG-ACCTTTTGGCTAATCTCCCACACGGTCCTGTACAGCGCCTTGATGCG 379037 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTA-TGATCAAATTTTTA 22402 | | || || | || |||||| || ||| | ||| | | ||| | || Sbjct 379036 GTCA-GGAATGCCAGCAATGTTCTGGATCGAGCCGCCGT-GTGCAATAATCTTTTGCTTC 378979 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGAC---GGTTCACC 22459 || | |||||||| | |||| || | || | ||| | | |||| ||| Sbjct 378978 ATAGAGTCGTTCCAGAGGCCGAGCTCGACGAGTTC---GCGCAGGAGCCACGGGTTGACC 378922 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || || |||||||| | || ||||| || |||||||||| ||| | || || || Sbjct 378921 ACCTGGAACTCGCCAGCCAGCACGCGACGCATGTAAATGTTGCTCGTGTAGGGCTCAAAG 378862 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 | || || || || ||||| ||||| || ||||||||||| |||| || ||| Sbjct 378861 CACTCGTTAAAGCCAAGGATCTGGCTCGTCGAGGCTGTCGGCATCGGTGCCATGAGCAGC 378802 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCG 22639 ||||| | | ||||||| || ||| | ||||||| | ||| ||||| || || Sbjct 378801 GAGTTGCGAAGACCGTGCTGTGCAATCTGGGCCTTGAGCGAGGTCCAATCCCATAGGTCC 378742 Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGC 22697 | ||| || || |||||| || |||||||| | ||| |||| || || |||| Sbjct 378741 GTCGGTGTGCGGTT---CCACATGTCATATTGCAAAAGGCCCTGCGAG--GCAGGACTGC 378687 Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757 | ||||| || ||||| || || || || || || |||||||| ||| | || Sbjct 378686 CCTCGTAGGTCTCGTAGGGGCCGTACTCGGCCGCCAGCTCGCAGCTGCGCTCAAGGGCTG 378627 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCG-GCGAC---GCTTTCG 22813 | | || || ||||| || |||| | ||||| || | || || | ||| || Sbjct 378626 CATGGTAGATTGTCTCAAATATTTGCACGTTCA----GGAGACGAGCCTCCTGGCTGTCA 378571 Query 22814 TACGGCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGG 22872 |||| ||| | ||| |||| || |||||||||| |||||||| || |||||||| || Sbjct 378570 AACGG-ATAGCCCATGATCATAAAAGCGTCCGCCAGGCCCTGAACACCGATACCGATGGG 378512 Query 22873 TCGGTTTTTCAGATTCGAC--ACTTTTGC-CTCGGGCAAAGGATACCAATTCGAATCGAT 22929 |||| || |||||| || | || ||| || || || | || ||||| Sbjct 378511 GCGGTGGCGCATATTCGAGCGACGTGCGCTCTC---CACGGGGTAGTAGTTAATGTCGAT 378455 Query 22930 TGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA 22989 | | ||||| ||| || ||| | |||| | | |||| ||| Sbjct 378454 GATGCGGTTCAGGTTCTTGCACACCACCTTCGACACATCGTGCAGGCGCTGGAAGTTGTA 378395 Query 22990 A-------ACGCCCGATTG--TACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCA 23040 |||| | | || | ||| |||| | | ||||||||||| || ||||| Sbjct 378394 CGTCTTGGACGCGCCAGTGCCTTCAATAAACGTCGGCAGAGCGATCGAGGCCAGGTTGCA 378335 Query 23041 TACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTT 23100 ||||||| ||| || || ||||||| | || ||||| || || ||| | ||| Sbjct 378334 TACGGCCGTCTCTTCCGGCGAGCTGTACTCGATGATCTCGGTGCACAGGTTGGAGCTCTT 378275 Query 23101 TATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTA 23160 || ||||||| || |||||||||| || || ||| ||| |||||||| || ||| | Sbjct 378274 AATTGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCCGAGTCCTTGTACAGGATGAA 378215 Query 23161 CGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC 23220 ||| | |||||||| | ||| | ||| | || || ||||| |||| || | || Sbjct 378214 CGGATTACCCGTCTCAATCTGGGCCTCCAAAATGGCGTACCACAACTTCTGCGCCTTGAC 378155 Query 23221 ACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280 | ||| | || || |||||| | |||||| || ||||| || | || Sbjct 378154 AGAGCGCTTAGCACGCCCCTCACGCTCGTAACGCTCGTACAAAGCTTCAAACTCCTCGCC 378095 Query 23281 GTAACAGTCGGCCAGGCCGGGCGATT--GCATCGGACACATGAG-----ACTCCACATTG 23333 || ||||| | ||| ||||| | | ||| || ||||| || | ||| |||| Sbjct 378094 ATAGCAGTCAGACAGACCGGGGCACTCGGCA--GGGCACATCAGCGACCAGTCCCCATTC 378037 Query 23334 AGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGC 23393 | |||||||| | |||||| || || || ||||| || ||| ||||| |||| Sbjct 378036 TGC-----TCAACGCGACGCATAAACAGGTCGGGGATCCACAGCGCGAGGAACAAGTCGC 377982 Query 23394 GGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCG 23453 | |||||||| || || |||||| |||||| || || | ||| || ||||| |||| Sbjct 377981 GTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGGTCGATAAATTCAAACACATCCG 377922 Query 23454 CATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGA 23513 ||||| ||||| ||||||| |||||| ||||| || | ||| |||||||||||||| | Sbjct 377921 AGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTGTTGCCGCCCTGATCCA 377862 Query 23514 CGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGC 23573 |||| || || || ||||||||||| | ||||| ||||| | |||||| | ||||| Sbjct 377861 CGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTTACTCACGCCGT 377802 Query 23574 CTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTC 23633 | ||| || | ||| || | || |||| |||||| | || | || ||||| | Sbjct 377801 TTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGGCCAATGCCAC 377742 Query 23634 CGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGT 23693 || ||| || || ||||| || || || || ||||| || |||||||| || | Sbjct 377741 CGGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCATAAATGCCCTCAATCGAAT 377682 Query 23694 CCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGA 23753 | || || | ||| | ||| ||||| ||||| || | | ||||||| | || || Sbjct 377681 CGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGTACCCGCATTGA 377622 Query 23754 ACAGTGTCGGGCTGGCGTGCGT-AAAGTATCCATTCGACAT-TAGATTGTACGTGTCGAT 23811 |||| || || |||||||| |||| | | | ||||| ||| |||||||| || || Sbjct 377621 ACAGGGTTGGCGACGCGTGCGTGAAAGCCTTC-TCGGACATGTAG-TTGTACGTCTCAAT 377564 Query 23812 GGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGG 23871 ||| | || ||||| ||||| ||||| | || || ||||| | ||||| ||||| Sbjct 377563 GGCACTCTTGATATCCTCGCCGTGGATACCAACAGCCACACGCATGAGCATGTGCTGAGG 377504 Query 23872 TCTCTCG--ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAAT 23929 | |||| | | | | ||||| || | ||| || || || | | ||| || ||| Sbjct 377503 GCGCTCGGCAACCTTA--CCGTTGATCCGCAGCAGGTAAGAGCGCTCAAGCGTCTTGAAT 377446 Query 23930 CCAAAATAGTCATAGTTAAAGTCACGATCGT 23960 || ||| ||| |||| |||||| || |||| Sbjct 377445 CCGAAAAAGTTGTAGTGAAAGTCGCGCTCGT 377415 Score = 226 bits (250), Expect = 3e-54 Identities = 586/879 (67%), Gaps = 53/879 (6%) Strand=Plus/Minus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 |||||| | || || ||| || | || || ||| | |||||||| ||||| || || Sbjct 366209 TTTGTCCTTTTCCCTATTCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCGGAGGCC 366150 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTC 57659 ||||| ||||||| ||||| | |||||||| || || ||| ||| ||||| || | Sbjct 366149 TCGTTCTGGACCGCTGAAGAGATGGACCTGTCGAAAGACCTGCACGACTGGGACCACCGC 366090 Query 57660 A---AAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | | || |||| | | ||| | | ||||| ||||||| || ||||| || ||| Sbjct 366089 ATGAACGACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCGTTCTTTGCCGCCTCGGAT 366030 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 || || || || ||||| ||||||| | ||| || ||||| | | | ||||| Sbjct 366029 GGCATCGTCAATGAGAACCTGGTCGAGCGCTTTAGCGCCGAGGTGCAGGCGGCCGAGGCC 365970 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 | ||||||||||| ||||| | || || ||| | || || |||| ||| ||||| Sbjct 365969 CGCTGCTTTTACGGCTTTCAGATTATGATGGAGAACATTCACTCGGAAACGTACTCGCTC 365910 Query 57837 CTCATCGATACGTAC----GTGAA--GGA-CAACGACGAGAAACGTAGACTGTTCAACGC 57889 || ||||| || ||| |||| ||| || || |||| | | | || || || Sbjct 365909 CTGATCGACACCTACATCCGTGAGCCGGAGCAGCG-CGAGTATC------TCTTTAATGC 365857 Query 57890 GATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGGATA-- 57944 |||||| || || |||| ||| |||| ||||| || ||| | | ||||| Sbjct 365856 GATCGAGACGATCCCCG---TCGTCAAGCAAAAGGCCGACTGGGCCCTGCGCTGGATCTC 365800 Query 57945 --AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTA 58002 | ||||| ||| ||||| | ||| | || | || || || ||||| || |||| Sbjct 365799 GGACAAGCGT----GCCTCGTTCTCGGAGCGCCTTGTGGCTTTTGCAGCCGTGGAGGGTA 365744 Query 58003 TATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCG 58062 | || || ||||| |||||| | || || ||| | ||||| || ||||| ||||||| Sbjct 365743 TCTTTTTCTCGGGTTCGTTTGCGTCGATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCCG 365684 Query 58063 GCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGT 58122 ||||| |||| |||||| | || ||||| ||||| ||||| || || || ||||| | Sbjct 365683 GCCTGTCGTTCTCGAACGAGCTCATTTCGCGTGACGAAGGTCTGCACACCGACTTTGCCT 365624 Query 58123 GCCTAATGTACTCTCACATTGTCAATAAAC-CGAC--GCGGGATCGCATCTTGGA---CA 58176 |||| | || | | | || || | || | | || || || | || Sbjct 365623 GCCTCCT---CTTTAGCCACCTGAAGAAGCGCGCCCACCCCGA---CACAGTGAACCGCA 365570 Query 58177 TTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCA 58236 | || || ||||| || || || || | || ||| | ||||| || || || || | Sbjct 365569 TCATTACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCTCTGCCCGTCTCGC 365510 Query 58237 TGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTT 58296 || | || |||||| |||||| |||||||||||||||| |||||| | | Sbjct 365509 TGATTGGCATGAACGCCCGCCTGATGTGCCAGTACATTGAGTTTGTGGCCGAC---CGTC 365453 Query 58297 TGCTCG--AACTGATTGGAGAGCGT---CATTACAACACGAAAAATCCGTTTGATTTTAT 58351 |||||| ||| | || | | | || |||||| ||| ||||| ||||| ||||| Sbjct 365452 TGCTCGTCAAC--CTCGGCAACCCTAAGCACTACAACTCGACGAATCCCTTTGACTTTAT 365395 Query 58352 GAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 | | || ||||| |||||||| | ||||||||||| Sbjct 365394 GGAGAACATTTCGCTGCAGGGCAAGTCGAACTTTTTCGA 365356 >seq4 Length=1186707 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| |||||||| | || |||||| | || Sbjct 398863 CATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTTGAGGTTGAATCCTC 398922 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 398923 AGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 398982 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || ||||| || || ||| | || ||| || ||||||| || || Sbjct 398983 ACAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGTACCCTGAGCGACTACAA 399042 Query 31372 CATTCAAAAAGA 31383 |||||| || || Sbjct 399043 CATTCAGAAGGA 399054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766327562960