Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq8 152 6e-32 >seq8 Length=423986 Score = 152 bits (168), Expect = 6e-32 Identities = 390/589 (66%), Gaps = 10/589 (2%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||||||||| ||||| | ||| | ||||| || |||| || Sbjct 365623 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 365682 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||| ||||| || ||||| || || || || || || || || || ||| Sbjct 365683 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 365742 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCT-GTCATG 33757 || || || || || ||||| || | ||| | ||| | | ||| | |||| ||| Sbjct 365743 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 365801 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | ||||| |||||||| | || || || ||||| || || ||||| Sbjct 365802 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 365861 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||||||||| | | | || | || || ||||||| || ||| | Sbjct 365862 AAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGT 365921 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 |||||| |||||||| || || |||||||| ||||| || || | ||||||| Sbjct 365922 TTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGC 365981 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 |||||| || | | ||| || || | | || ||||| || || ||||| ||| || Sbjct 365982 CTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGC 366041 Query 33998 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCC 34053 ||| ||||||| || || | | ||| | || | || ||| | | | || Sbjct 366042 AAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCAT-TGTCGTTCATGCGGTGGTCCC 366100 Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113 | || | | ||||| || | |||| ||||| | ||||| || || ||||| |||| Sbjct 366101 AGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCT 366160 Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 | || ||||| | |||||| || || || | || ||||||| ||||| Sbjct 366161 TCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 366209 Score = 140 bits (154), Expect = 4e-28 Identities = 439/673 (65%), Gaps = 8/673 (1%) Strand=Plus/Minus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||||| |||||| || || | | || || || |||||| || || || ||| Sbjct 378063 GGGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATC 378004 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || | || | || | || | ||| || || || ||||| || Sbjct 378003 CACAGCGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGG 377944 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 |||| || | | | ||| || ||||| || |||| ||| ||||| | | || || Sbjct 377943 TCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGG 377884 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || |||||||| | ||| | ||||| || || || || | | ||| || Sbjct 377883 CGCTTGTTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGC 377824 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | ||||||||| | || || || || | || || || | |||||||| || Sbjct 377823 ACAATACCGTTACTCACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTG 377764 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGT 63592 || || || || || || ||| | || ||||| | || || ||| || | ||| Sbjct 377763 TGGATGTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGCGT 377705 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63652 |||||| ||||| || || ||| || |||| | | || || || ||||| || Sbjct 377704 GTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTG 377645 Query 63653 GTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63712 | | | || |||||||| || | ||| || || |||||||| || || || || Sbjct 377644 AGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGA 377585 Query 63713 AA-GTAGATTGTACGTCTCAATAGCTGAGTCT--ATATCCCATTGATGAATTCCTACTGC 63769 | |||| |||||||||||||| || | ||| |||||| || || || || || Sbjct 377584 CATGTAG-TTGTACGTCTCAATGGC--ACTCTTGATATCCTCGCCGTGGATACCAACAGC 377528 Query 63770 GACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTA 63829 |||||||| | |||||||||||| | || ||| || ||| || || || ||| Sbjct 377527 CACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGGTA 377468 Query 63830 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889 || || | || || || || ||| ||||||| |||||| || |||||||| | Sbjct 377467 AGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGAC 377408 Query 63890 AACCGAATTGAGC 63902 | |||| | |||| Sbjct 377407 AGCCGAGTCGAGC 377395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817497654640