Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8 140 4e-28 >seq8 Length=423986 Score = 140 bits (154), Expect = 4e-28 Identities = 390/592 (66%), Gaps = 16/592 (3%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| ||||| ||||| | ||| | ||||| || |||| || Sbjct 365623 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 365682 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| ||||| ||||| || ||||| || || |||||||| || || || || || Sbjct 365683 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 365742 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC-GGCAC---TGTCATG 36333 || || || || || ||||| || | ||| | ||| | | ||| ||||| |||| Sbjct 365743 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 365801 Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||| | ||||| |||||||| | || || || || ||||| || ||||| Sbjct 365802 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 365861 Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTA----TCAATCAAAAGACTAT 36449 ||||||||| | | | || | || ||||| || |||| || | Sbjct 365862 AAAGAGATA----CTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGT 365917 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 || ||||||| |||||||| || || || ||||| ||||| || || | ||||||| Sbjct 365918 ACGTTTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGG 365977 Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569 ||| || || | | ||| || || | | || ||||| || || || || || Sbjct 365978 CCGCCTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGG 366037 Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTAT 36626 | ||||| ||||||| || || | | ||| | || || | || | | | | Sbjct 366038 CGGCAAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGT 366097 Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 ||| || | | ||||| || | |||| ||||| | ||||| || || ||||| | Sbjct 366098 CCCAGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCG 366157 Query 36687 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 |||| || ||||| | |||||| || || || |||| || |||| ||||| Sbjct 366158 CCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 366209 Score = 129 bits (142), Expect = 8e-25 Identities = 436/672 (65%), Gaps = 8/672 (1%) Strand=Plus/Minus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||||| |||||| || || | | || || || |||||| || || || ||| Sbjct 378063 GGGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATAAACAGGTCGGGGATC 378004 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || | || || || | | | ||| || || || ||||| || Sbjct 378003 CACAGCGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTTGCCGTGGTTCTTGCGCAGG 377944 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 |||| || | | | ||| | ||||| || |||| ||| ||||| | | || || Sbjct 377943 TCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGG 377884 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || |||||||| | ||| | ||||| || || || || | | ||| || Sbjct 377883 CGCTTGTTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGC 377824 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326 | |||||| || || || || || | || || || | |||||||| || Sbjct 377823 ACAATACCGTTACTCACGCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTG 377764 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGT 66385 || || || || || || ||| | || ||||| | || || ||| || | ||| Sbjct 377763 TGGATGTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGCGT 377705 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445 ||||| |||||||| || ||| ||| |||| | | || || || ||||| || Sbjct 377704 GTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTG 377645 Query 66446 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 66505 | | || |||||||| || | ||| || || |||||||| || || || || Sbjct 377644 AGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGA 377585 Query 66506 AA-GTAGATTGTACGTCTCAATAGCTGAGTCT--ATATCCCATTGATGAATTCCTACTGC 66562 | |||| |||||||||||||| || | ||| |||||| || || || || || Sbjct 377584 CATGTAG-TTGTACGTCTCAATGGC--ACTCTTGATATCCTCGCCGTGGATACCAACAGC 377528 Query 66563 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 66622 |||||||| | |||||||||||| | || | | ||| ||| || || || ||| Sbjct 377527 CACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGGTA 377468 Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682 || || | || || || || ||| ||||||| |||||| || |||||||| | Sbjct 377467 AGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGAC 377408 Query 66683 AACCGAGTTGAG 66694 | |||||| ||| Sbjct 377407 AGCCGAGTCGAG 377396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172693046920