Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 seq6 91.5 1e-13 >seq8 Length=423986 Score = 134 bits (148), Expect = 1e-26 Identities = 297/444 (67%), Gaps = 5/444 (1%) Strand=Plus/Minus Query 52618 GAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCA 52677 || || || || || ||||| ||||| ||| | ||||| |||||| |||||| | Sbjct 365777 GAGCGCCTTGTGGCTTTTGCAGCCGTGGAGGGTATCTTTTTCTCGGGTTCGTTTGCGTCG 365718 Query 52678 ATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATA 52737 || || | |||| | |||| | ||||||||||| |||| |||||| | || Sbjct 365717 ATCTTCTGGCTCAAGAAGCGGGGCCTCATGCCCGGCCTGTCGTTCTCGAACGAGCTCATT 365658 Query 52738 TCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTGTATTATAATACGCGCGTTAAA 52797 ||||| |||||||| ||||||| || ||||| || | | || || | || Sbjct 365657 TCGCGTGACGAAGGTCTGCACACCGACTTTGCCTGCCTCCTCTTTA----GCCACCTGAA 365602 Query 52798 GAAAAATTGTCATATGAAAAAATTCTAGA-CATGTTTAAAGAGGCCGTCGACATTGAAAA 52856 ||| || | | | | | ||| ||| ||||| || | |||||| | Sbjct 365601 GAAGCGCGCCCACCCCGACACAGTGAACCGCATCATTACGGAGGCTGTGGCCATTGAGCA 365542 Query 52857 AGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTG 52916 || ||||| || |||||| | ||||| || || | ||||||||||| | ||||||| Sbjct 365541 GGACTTTTTGACCGACGCTCTGCCCGTCTCGCTGATTGGCATGAACGCCCGCCTGATGTG 365482 Query 52917 CGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTA 52976 | ||||||| |||||||| || ||| | ||| | | | ||||| | || || |||| Sbjct 365481 CCAGTACATTGAGTTTGTGGCCGACCGTCTGCTCGTCAACCTCGGCAACCCTAAGCACTA 365422 Query 52977 TAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTT 53036 || || || |||||| |||||| | ||||| ||||| ||||||| | ||||| Sbjct 365421 CAACTCGACGAATCCCTTTGACTTTATGGAGAACATTTCGCTGCAGGGCAAGTCGAACTT 365362 Query 53037 TTTCGAGAGACGTGTGGGCGAGTA 53060 ||||||| | || || | ||| || Sbjct 365361 TTTCGAGCGCCGCGTCGCCGACTA 365338 >seq6 Length=615380 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| || ||||||| |||| || || ||||| || || ||| | Sbjct 241370 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAA 241429 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 |||||| || || || || || || || || || ||||| ||| || || | | Sbjct 241430 GATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 241489 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | ||||||| | ||||||||||| ||| | |||||| ||||||| || || || Sbjct 241490 CTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTCAGGGTCTTGAC 241549 Query 139753 GAATATTTGCATAGC 139767 ||| | |||||| || Sbjct 241550 GAACACTTGCATGGC 241564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063919389600