Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 167 3e-36 >seq8 Length=423986 Score = 167 bits (184), Expect = 3e-36 Identities = 393/588 (67%), Gaps = 8/588 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||||||||| ||||| | ||| || ||||| || |||| || Sbjct 365623 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 365682 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||| ||||| || ||||| || || |||||||| || || || || ||| Sbjct 365683 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 365742 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCT-GTCATG 50135 || || || || || ||||| || ||||| | ||| | | ||| | |||| ||| Sbjct 365743 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 365801 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | ||||| |||||||| | || || || ||||| || || ||||| Sbjct 365802 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 365861 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||||||| | | | || | || || ||||||| || ||| | Sbjct 365862 AAAGAGATACTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGTACGT 365921 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 |||||| |||||||| || || |||||||| ||||| || || | ||||||| Sbjct 365922 TTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGGCCGC 365981 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 |||||| || | | ||| || || | | || ||||| || || || || ||| || Sbjct 365982 CTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGGCGGC 366041 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGT--GTTAGTTTATTCCA 50432 ||| ||||||| || || | | ||| || || ||| || | | | | ||| Sbjct 366042 AAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCA 366101 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | | ||||| || | || | ||||| | ||||| || || ||||| ||||| Sbjct 366102 GTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCCGCCTT 366161 Query 50493 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || ||||| | |||||| || || || | || ||||||| ||||| Sbjct 366162 CTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 366209 Score = 138 bits (152), Expect = 2e-27 Identities = 447/687 (65%), Gaps = 8/687 (1%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 || || || ||| |||| ||||||| |||||| || |||| | || || || |||| Sbjct 378078 CCGGGGCACTCGGCAGGGCACATCAGCGACCAGTCCCCATTCTGCTCAACGCGACGCATA 378019 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || || || || ||||| || || | || | || | | | || || || || Sbjct 378018 AACAGGTCGGGGATCCACAGCGCGAGGAACAAGTCGCGTGCGCGCACTTCTTCCTTGCCG 377959 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || |||| || | | | ||| || ||||| || |||| ||| ||| Sbjct 377958 TGGTTCTTGCGCAGGTCGATAAATTCAAACACATCCGAGTGCCAGGGCTCCAGGTAAATG 377899 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | || || || ||||| || |||||||| | ||| | ||||| || || || Sbjct 377898 GCAAAGGCGCCTGGGCGCTTGTTGCCGCCCTGATCCACGTAGCGCGCGGTATTGTTGTAC 377839 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | | ||| || | |||||| || || || || || | || || || Sbjct 377838 ACACGAAGCATGGGCACAATACCGTTACTCACGCCGTTTGTGCCAGCAATGTACGAGCCC 377779 Query 80191 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250 | |||||||| || || || || || || || ||| | || ||||| | || Sbjct 377778 GTCGCACGAATGTTGTGGATGTTCAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCA 377719 Query 80251 CATCGTTTTAA-CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAA 80309 || ||| || | ||| ||||| |||||||| || ||| || |||| | | || || Sbjct 377718 CA-CGTCTTGAGCGTGTCATAAATGCCCTCAATCGAATCGTCCTTCATACTGACAAGGAA 377660 Query 80310 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369 || ||||| || | | || |||||||| || | ||| || || |||||||| Sbjct 377659 GCACGACGACATCTGAGGGTGGGGCGTACCCGCATTGAACAGGGTTGGCGACGCGTGCGT 377600 Query 80370 AAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCT--ATATCCCATTG 80426 || || || |||| |||| |||||||||||||| || | ||| |||||| Sbjct 377599 GAAAGCCTTCTCGGACATGTAG-TTGTACGTCTCAATGGC--ACTCTTGATATCCTCGCC 377543 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 || || || || || |||||||| | |||||||||||| | || | | ||| || Sbjct 377542 GTGGATACCAACAGCCACACGCATGAGCATGTGCTGAGGGCGCTCGGCAACCTTACCGTT 377483 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 || || || |||||| || | || || || || ||| ||||||| |||||| Sbjct 377482 GATCCGCAGCAGGTAAGAGCGCTCAAGCGTCTTGAATCCGAAAAAGTTGTAGTGAAAGTC 377423 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAG 80573 || |||||||| | | |||||| ||| Sbjct 377422 GCGCTCGTAAATGACAGCCGAGTCGAG 377396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268683281320