Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20nana_20[genbank_20GCA_5F001600835.1_202016-03-01] 13 sequences; 7,579,486 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8 149 8e-31 >seq8 Length=423986 Score = 149 bits (164), Expect = 8e-31 Identities = 392/593 (66%), Gaps = 18/593 (3%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| ||||||||| || || | ||| | ||||| || |||| || Sbjct 365623 CAGGCAAAGTCGGTGTGCAGACCTTCGTCACGCGAAATGAGCTCGTTCGAGAACGACAGG 365682 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| ||||| ||||| || ||||| || || |||||||| || || || || ||| Sbjct 365683 CCGGGCATGAGGCCCCGCTTCTTGAGCCAGAAGATCGACGCAAACGAACCCGAGAAAAAG 365742 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC-GGCAC---TGTCATG 42240 || || || || || ||||| || | ||| | ||| | | ||| ||||| |||| Sbjct 365743 ATACCCTCCACGGCTGCAAAAGCCACAAGGCGCTC-CGAGAACGAGGCACGCTTGTCCGA 365801 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | ||||| |||||||| | || || || ||||| || || ||||| Sbjct 365802 GATCCAGCGCAGGGCCCAGTCGGCCTTTTGCTTGACGACGGGGATCGTCTCGATCGCATT 365861 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTA----TCGATCAAAAGACTAT 42356 ||||||||| | | | || | || ||||| ||||||| || | Sbjct 365862 AAAGAGATA----CTCGCGCTGCTCCGGCTCACGGATGTAGGTGTCGATCAGGAGCGAGT 365917 Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416 || |||| || |||||||| || || |||||||| ||||| || || | |||||||| Sbjct 365918 ACGTTTCCGAGTGAATGTTCTCCATCATAATCTGAAAGCCGTAAAAGCAGCGGGCCTCGG 365977 Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476 |||| || || | | ||| || || | | || || || || || || || || Sbjct 365978 CCGCCTGCACCTCGGCGCTAAAGCGCTCGACCAGGTTCTCATTGACGATGCCATCCGAGG 366037 Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTA 42532 | ||||| ||||||| || || | | ||| | || | | ||| || | Sbjct 366038 CGGCAAAGAACGCCAGGACGTGGCTCACAAAGTGGCGCTCAT-TGTCGTTCATGCGGTGG 366096 Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592 | ||| || | | ||||| || | || | ||||| | ||||| || || || || Sbjct 366097 TCCCAGTCGTGCAGGTCTTTCGACAGGTCCATCTCTTCAGCGGTCCAGAACGAGGCCTCC 366156 Query 42593 GCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||||| || ||||| | |||||| || || || |||| ||||||| ||||| Sbjct 366157 GCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATAGGGAAAAGGACAAA 366209 Score = 129 bits (142), Expect = 8e-25 Identities = 354/535 (66%), Gaps = 8/535 (1%) Strand=Plus/Minus Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185 ||| || ||||| || |||| ||| ||||| | | || || || ||||| || ||||| Sbjct 377926 ATCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCGCCTGGGCGCTTGTTGCCGCCCTG 377867 Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245 ||| | ||| | ||||| || || || || | | ||| || | |||||| || | Sbjct 377866 ATCCACGTAGCGCGCGGTATTGTTGTACACACGAAGCATGGGCACAATACCGTTACTCAC 377807 Query 72246 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTAT 72305 || || || || | || || || | |||||||| ||| || || || || Sbjct 377806 GCCGTTTGTGCCAGCAATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGGCCAAT 377747 Query 72306 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTA 72364 || || ||| | || ||||| | || || ||| || | ||| ||||| |||||||| | Sbjct 377746 GCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGCGTGTCATAAATGCCCTCAA 377688 Query 72365 TACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 72424 | ||| ||| |||| | | || || || ||||| || | | || |||| Sbjct 377687 TCGAATCGTCCTTCATACTGACAAGGAAGCACGACGACATCTGAGGGTGGGGCGTACCCG 377628 Query 72425 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTC 72483 |||| || | ||| || || |||||||| || || || |||| |||| ||||||||| Sbjct 377627 CATTGAACAGGGTTGGCGACGCGTGCGTGAAAGCCTTCTCGGACATGTAG-TTGTACGTC 377569 Query 72484 TCAATAGCTGATTCT--ATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATAT 72541 ||||| || | ||| |||||| || || || || || |||||||| | ||| | Sbjct 377568 TCAATGGC--ACTCTTGATATCCTCGCCGTGGATACCAACAGCCACACGCATGAGCATGT 377511 Query 72542 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 72601 ||||||| | || | | ||| || || || || ||| || || | || | Sbjct 377510 GCTGAGGGCGCTCGGCAACCTTACCGTTGATCCGCAGCAGGTAAGAGCGCTCAAGCGTCT 377451 Query 72602 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 | || || ||| ||||||| |||||| || |||||||| | | |||| | ||| Sbjct 377450 TGAATCCGAAAAAGTTGTAGTGAAAGTCGCGCTCGTAAATGACAGCCGAGTCGAG 377396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139090939880